| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0096 |
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| Symbol | |
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| ID | 4686306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 99880 |
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| End bp | 101130 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833089 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_980342 |
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| Protein GI | 121603013 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.809601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATT TGAGCTTCAC CGGCCTGCGC GCCGCAACCG GCATTGCTGC CGCCATGGCC
GCCATGCTTG CTTTTTCGCT GCCAGCCAGC GCGCAGGAAG ACCCGTCGGC GGCAAAAAGC
GCCCCGGCCC ATACCCTGAA AATCGGCGTC ATCGGTCCTT TCACGGGGGC GTCGGCAGAC
TTTGGCATCC CGATGCTCAA CGGCATCCAG CAGGCCGTGG ACGAAATCAA CGCCGGCGGC
GGCTACCTGG GCCGCAAGAT AGAAATCGTG CGCAAGGACG ACCAGGCCAA TCCCGATGTC
GGCCTGAAGC TGTCGCAGGA ACTGGTGGCC GAAAAGGTTG CCGCCACCAT CGGTTTTTGC
AACACCGGCG TCGCCGCCAA ATCGCTGGAG GTGTACCAGA CCCACCAGTT GCCGCTGATC
ATTCCTTGCG CCACCGGCAC GCCGCTCACG GCCAAATACC CGGGTCCGGC AAGCTACATC
TTTCGCACCT CGCCCAGTGA CGGCATCCAG GCGCCGTTCG TGGTCGAAGA CATTGTCAAG
CGCGGCTGGG ACAAGGTCGC CATATTTGCC GACACCACCG GCTATGGCGA AGCGGGCCTG
AAGGACGTTG AAGCCGCACT GGCCGCCAGG CAGCTCAAGC CGGTGCATGT GGCGCGGTTT
GAGCTGGGCG TGAAAGACCT GGGCGAGCCA CTGAAGGCGG CCAGGGCTGC CGGCGCCAAC
GTGGTGTTCA GCTACACGGT CGGGCCTGAA AACGCCGTGA TCGCGCGCGG GCGCCAGGCG
CTGGGCTGGA AGGTGCCGCA GGTCGGCGCC TGGACGCTGT CCTTTCCCTT CTTCATTGAA
GGCGGCAAGG AAGCCACCGA GGGCGCGCTG ATGGCGCAGA GCTTCATTGC CGAGCCCAGC
AACGAGCGCC GTGCGTCCTT TCTGACCAGC TATGCGCGCA AGTACAAGGT CAGGAAAATC
CCGGTCCCGA TGGCCGCCGC GCAGGGCTAT GACGCGGTCT ACGTTCTGGT GCATTCGCTG
TTCGGCATAC GCGACGGCAA ACTCACCGGC CCGGCCATCA AGGCGGCGCT CGAAAGCAAA
AACCGCCCTT ACTACGGCGT CATCGCCACC TACGAGCAGC CTTTCAGCAA GCAGGACAAG
GAAGCCACGA CGCAAAACAT GCTGGTCATG GGCATGGTGA AAGATGGCGC GGTGACCTTT
GCCTATCCCG AGGACGCCAA GCGCAACCTG TTTGTCCAGC GCAAGCAGTA A
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| Protein sequence | MAYLSFTGLR AATGIAAAMA AMLAFSLPAS AQEDPSAAKS APAHTLKIGV IGPFTGASAD
FGIPMLNGIQ QAVDEINAGG GYLGRKIEIV RKDDQANPDV GLKLSQELVA EKVAATIGFC
NTGVAAKSLE VYQTHQLPLI IPCATGTPLT AKYPGPASYI FRTSPSDGIQ APFVVEDIVK
RGWDKVAIFA DTTGYGEAGL KDVEAALAAR QLKPVHVARF ELGVKDLGEP LKAARAAGAN
VVFSYTVGPE NAVIARGRQA LGWKVPQVGA WTLSFPFFIE GGKEATEGAL MAQSFIAEPS
NERRASFLTS YARKYKVRKI PVPMAAAQGY DAVYVLVHSL FGIRDGKLTG PAIKAALESK
NRPYYGVIAT YEQPFSKQDK EATTQNMLVM GMVKDGAVTF AYPEDAKRNL FVQRKQ
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