| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0092 |
|---|
| Symbol | |
|---|
| ID | 4687322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 96335 |
|---|
| End bp | 96853 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639833085 |
|---|
| Product | flavin reductase domain-containing protein |
|---|
| Protein accession | YP_980338 |
|---|
| Protein GI | 121603009 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.817561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.852259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCCC TCTCCCCCCT TCGCAAAGCG AGCAGCCCGA GCTTTTCTCC CCTGGAATTC
CGCGCCTCGC TGGCCATGTT TGCCACCGGC GTGACCATCG TCACCGCGCG CACGCCGGCC
GGCGTGCTGG TCGGCCTGAC CGCCAATTCA TTCAACTCGG TGTCGCTCAA CCCGCCGCTG
GTGCTCTGGA GCCTGTCGCA GGCCGCCAGT TCGATGGCTG CGCTGAGCAC CGGCTCGCAC
TACGCCATCA ACATCCTGGC GGCCGACCAG AAAGAGCTGG CCGAGCGCTT TGCCAGCCGG
CGCGAAGACC GCTGGACGGA TGTGGCCTTC ACCGAAGGGA TTGGCGGCGC GCCGCTGCTC
GACGGCGCGG CCGCGACCTT TGAATGCTTC AACCGCAGCC GCTACGAAGA AGGCGACCAT
GTGATCTTTG TCGGCGAGGT CGAGCGCTGC AGCCACCGCG CCGGCGCCGC GCCGCTGCTG
TTTCATGGCG GCAGGTTCTA CACCGAGCAT CCGCTCTGA
|
|---|
| Protein sequence | MSPLSPLRKA SSPSFSPLEF RASLAMFATG VTIVTARTPA GVLVGLTANS FNSVSLNPPL
VLWSLSQAAS SMAALSTGSH YAINILAADQ KELAERFASR REDRWTDVAF TEGIGGAPLL
DGAAATFECF NRSRYEEGDH VIFVGEVERC SHRAGAAPLL FHGGRFYTEH PL
|
|---|
| |