| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0091 |
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| Symbol | |
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| ID | 4686429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 93497 |
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| End bp | 96289 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833084 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_980337 |
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| Protein GI | 121603008 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00954137 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.993222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAACCC AGATGCGGGC GCATGACTGG TCCACCTCCG GGCTGGGCAG TCCTGCTTCC
TGGCCGCAGC CGCTCAAGAC GGTGGCCGGC CTCATGCTTC ACTGCAGAAC GCCGGTGTTT
CTGGCCTGGG GGCCGGAGTT GAGCCTTTTG TACAACGATG CCTACCTGGA CATTCTTGGA
GAAAGGCACC CGGCGGCGCT GGGCCGGCCT TTGTACGAGG CCTGGGCCGA AATCCGGGCC
GAGATCGAAC CGCTGGTCAA CCAGGCATTG TCCGGCGAGC CTGTCTATTT TGAAGATGCT
GTTTTTACCC TGCGACGCAA GGGTGCGGAC GAACAGGCCT GGTTCAGCTT TTCGTATGCG
CCTGTCGATG GCCCGGACGG CACGGTTGCC GGGCTGTACT GCAACCTGAC GGAAACAACG
GCCAAGGTGC TGGCGGAAAA AAACCGGCAG GCGGAAACCC GTCGGCTTTA CAGCCTGTTT
GAACAGGCGC CGAGTTTCAT GGCCGTGGTG CACGGCTCCA GCCATGTCTA TGAACTGGCC
AATAGCGCCT ACCTTCGGAT GGCGGGGTGC CAGGATCTGG TCGGCAAAAC ATTCCGTGAG
GCAGTCCAGG GCATTGAAGA CCAGGGCTAT GTCGCGCTGC TGGATCAGGT CTATGCCACG
GGCCAGCCAT TCATTGGCAA CCGGATGCCG GTCATCTTTT CGCGTCACGC CGACGGGCCA
CCCGAGCAGT GCTTCGTGGA TTTTATTTTT CAGCCCATCA CCGCTCCGGA TGGCGTGGTC
AACGGCATTT TCATTGAAGG CAACGACGTC ACGGAGCAGG TCCGCACCGA GGACGATCTG
CGCAAAAGCA GAATCGCCGG CCTGGAGACG GCCCAGCAGT TGAACGCTTT GCTGCAAGCC
GCGCCAGTGG CCATCGTGAT GGCGGACATG CACGGAAAAC CCCTGCGCTT CAATCCGGCC
AGCCGCCAGC TCTGGGGCGA CCATCCGGCG TCGGAAAGCA TTGCCGGCTA CGCTGAGCGC
AAAGGCTGGT GGGCTGACGG CTCGGTCCGG CATGGCTGCC GGCTTGAAGC GCACGAATGG
GCGCTGGCCC GCGCCCTGCA AGGCGAGGAA GCACCGCGCG ACACCGTCGA GATAGAACCT
TTCGGCAAAC CCGGCATTCG CCGGACCATC CTGAACTGCG GCGCGCCGGT GCGAAACCTG
GACGGAGACA TCATCGGCTC CGTCGCCGCC CAGATGGACA TCAGCGACCG CGTCGCCATC
GAAGCCGCGC TGCGCGAAAC CGTGACCCAG TACCGCACCA TCACCAATGC CATACCGCAG
ATCGTCTGGG CCACGCGTCC CGACGGCTAC CACGACTACT TCAACCAGCA GTGGTACGAC
TACACCGGCG TTCCCCAGGA CTCCACGGTC GGGGAAGGAT GGAAGGGGCT GTTTCATCTT
GAGGACCAGC TACAGGCGGC CAAAAACTGG CGGCACAGCC TGGCCACCGG CGAACCCTAC
GAAATCGAAT ACCGCCTGCG CCACCACTCC GGCCAGTACC GCTGGAACCT GGGCCGGGCG
CTGCCGGTTC GCAACGAACA AGGCGCCATC GTCCGGTGGA TGGGAACCTG CACCGATATT
CATGAACAAA AGCTGGCGCA GGAGGGCTTG CTGCAGGCCG ACCGGCTCAA GGACGAGTTC
CTGGCCATGC TCGCCCACGA ACTGCGCAAC CCCCTGGCGC CGATTGCGAC GGCTGCGCAC
CTGCTGTCCA CGGGCACGCT GGACCCTGAA GGGCTGTCGC GATTGAGTGA AGTGATTTCA
CGCCAGGCCG GGCACATGAC CCGCCTGATT GATGATTTGC TGGATGTGTC GCGCGTCACC
TGGGGCCAGG TCACGCTGGA CAAAAATCCG CTGGACATGA ACAGCATCGT CACCGAGGCG
GTCGAGCAGG TCAGGCCCTT GCTGCAGGCC AAGTCGCAGC ATCTGGACAT CCAGCTGTCT
CCGCAACGCA ACCTGGTTTC GGGCGACCGG ATGCGGCTGG TCCAGGTGCT GGCCAATGTG
CTCAACAACG CCGTCAAGTA CACGCCCGAC GGGGGCCGCA TCACCCTTCG CGTGGTCGAG
GACGACAGCC ACCTGACGGT TTGCGTGCGC GACAACGGCA TCGGCATGTC CCGCGAGCTG
CTGGCCATCG CCTTTGAGCT GTTCACCCAA GGCGAAAGAA CCTCCGACCG CACCCAGGGC
GGGCTGGGCA TCGGCCTGGC CCTGGTCCAG ACCCTGGTTC ACCTGCATGG CGGAACGGTC
AGGCTGCACA GCGAAGGAGC CGGACTGGGC AGCGAGTTGA CGATGGTCCT GCCGCGCCTG
CCGCAGGACG ACGGGCCGCG CCGTTTCGAT GCCGGCGATG CCTTGGCCGT GCCGGCCCGC
GAATCGCTGC GCGTCATGGT GGTCGATGAC AACGTCGATG CCGCGCGGCT GCTGGGCATG
TTCGTCGAAC TGCTGGGGCA CGAGGTTTTC GTGCAGTTCC ACCCGGCCAG CGCCATTGAA
TGCGCGCACC AGGTGCAGCC CGACATCTGC CTGCTCGACA TCGGCCTGCC CGACATGGAC
GGCTACACGC TGGCGCGGCA GTTGCACCGG ATACCCGGCA TGGAAAACAC CGTACTGGCG
GCGGTCACCG GCTACAGCCA GCCCAGGGAC AAGCAGGCCG CGTTCGCCGC CGGCTTCAAC
TTTCACTTTG CCAAGCCCAT CAGCGCGCAG CAGCTGGAGT CGTGGCTGGC CGATGTGACC
AGGGGCCGGG AAAGCCTGTC AGCCAGCCCC TGA
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| Protein sequence | MQTQMRAHDW STSGLGSPAS WPQPLKTVAG LMLHCRTPVF LAWGPELSLL YNDAYLDILG
ERHPAALGRP LYEAWAEIRA EIEPLVNQAL SGEPVYFEDA VFTLRRKGAD EQAWFSFSYA
PVDGPDGTVA GLYCNLTETT AKVLAEKNRQ AETRRLYSLF EQAPSFMAVV HGSSHVYELA
NSAYLRMAGC QDLVGKTFRE AVQGIEDQGY VALLDQVYAT GQPFIGNRMP VIFSRHADGP
PEQCFVDFIF QPITAPDGVV NGIFIEGNDV TEQVRTEDDL RKSRIAGLET AQQLNALLQA
APVAIVMADM HGKPLRFNPA SRQLWGDHPA SESIAGYAER KGWWADGSVR HGCRLEAHEW
ALARALQGEE APRDTVEIEP FGKPGIRRTI LNCGAPVRNL DGDIIGSVAA QMDISDRVAI
EAALRETVTQ YRTITNAIPQ IVWATRPDGY HDYFNQQWYD YTGVPQDSTV GEGWKGLFHL
EDQLQAAKNW RHSLATGEPY EIEYRLRHHS GQYRWNLGRA LPVRNEQGAI VRWMGTCTDI
HEQKLAQEGL LQADRLKDEF LAMLAHELRN PLAPIATAAH LLSTGTLDPE GLSRLSEVIS
RQAGHMTRLI DDLLDVSRVT WGQVTLDKNP LDMNSIVTEA VEQVRPLLQA KSQHLDIQLS
PQRNLVSGDR MRLVQVLANV LNNAVKYTPD GGRITLRVVE DDSHLTVCVR DNGIGMSREL
LAIAFELFTQ GERTSDRTQG GLGIGLALVQ TLVHLHGGTV RLHSEGAGLG SELTMVLPRL
PQDDGPRRFD AGDALAVPAR ESLRVMVVDD NVDAARLLGM FVELLGHEVF VQFHPASAIE
CAHQVQPDIC LLDIGLPDMD GYTLARQLHR IPGMENTVLA AVTGYSQPRD KQAAFAAGFN
FHFAKPISAQ QLESWLADVT RGRESLSASP
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