Gene Pnap_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0089 
Symbol 
ID4686113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp90501 
End bp92018 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content70% 
IMG OID639833082 
Productadenylate cyclase 
Protein accessionYP_980335 
Protein GI121603006 
COG category[S] Function unknown 
COG ID[COG3025] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.445935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC ACCCCCTTGC CCCCTCGCCG GAAGAAATCG AGCTCAAGCT GGCTTTGCCC 
ACGTCCAGCC CGTCCGGGCT GGCAGGCCTG GCCAAGCGGC TCGCGCAGAC GCCCGTGCTG
GCGCGCCGCA AAGCGACGCG GCAGCAACTG CACAACATCT ACTACGACAC CCCCGGGCAG
CGCCTGCACC AGAAGCGTGT CGCGTTGCGG CTGCGGCGCG TGGGCAGCGA CGCGAACCCG
TCATGGCTGC AGACCCTCAA GATGGGCGGC CGCAGCGACT CGGCCCTGAG CCAGCGCGGC
GAATGGGAAC TGCCCGTGCC CGGCGCCGAA CTGGCACGGC AGGCGCTTGA AGCCACGCCG
TGGTCCAAAT TTGACCCGGA CGGCAGCGTG TTCAAGGCGC TGGCGCCGTG CATCGTGACC
ACCTTCGAGC GCACCAGCTG GTCCGTGCGC AAGCGCGGCG GCAGCGTTGT CGAGGTGTCG
CTGGACATCG GGCAGGTCGT GGCCGGCGAC AGGCGCACCC CCATTTGCGA GCTGGAACTC
GAACTGCTCG CGGGGCAGCC GGCCGCGCTG TTCGACATCG CCCGGCAAAT CGCCCGCAGC
GTCGCGGTGC TGCCGCTCAA CGCCAGCAAG GCCGAGCGCG GCTACGCCTT GCTGCAGGAC
GCCCAGAGCC TGCCACTGCG CGCCCGGCCG CCGGCGCTGA CCCGGAACAT GGCCCTGCCG
CTGGCCGCGC AGTGCGTGCT GCGCGAAATG TTCGGCCAGT TCACCAGCAA CCTGAACACG
CTGACCCGCT CGGACGACCC CGAGGTGGTG CACCAGGCCC GCGTCGGCTG GCGGCGTTTC
AGGAGTGCGT GGCGGCTGTT CCAGCCCGCG CTGGCAGCGC ATGCGGCGGC GCCCGCCTGG
CAGTCGCTGG AGCCGCTGCT GATGTTCGTG GGCGAGTTGC GCGACCTTGA CGTGGCCCTG
AACGACACCC TGCCGCCGCT CGCGGCCGCC TACACCGCAG GCAACGCGCA GCGCGAAGAG
AAATGGCAGG CGATGCTCCA GGCCCTGACG CAGGCCGCCC TGCTGCAGCG CAAGTCCGTG
CGCCATGCGC TGCAAACGCC TGCCGTCGGC GCGACACTGC TGGCCATCAC GCAATGGCTG
GAAGAACTGC CTGCAAGCAA GGGGCCGGAC GATGCAAAAG CCGGGCCGGA CATCTCCCTG
CGCCGCTGGG CCAGGCAGCG CATCACGCGA CAGCACAAAA AGATGAAGCA AGCCCTCAAG
GACACCGCCC ATCCGGAGAG CCAGCACCGC GCGCGGATTC TCTCGAAGCG GCTGCGCTAC
GGCATCGAAG CCCTGCGTCC CCTGCTGCCC CGGCGGCAAG CCGAGCGCTG GCACGCCAAG
GCGACCGCGC TGCAGACCGG CATCGGGGCG ACGCGCGACA TCATGCAGGC GGGGGTGCTG
GCGGTCCGCT TCGAAGCCGA CCCGGGACTG GCCGAATTCC TGCGCGGCGT GGCCGCCGGT
CAGCCAGTCC CGCGCTGA
 
Protein sequence
MKKHPLAPSP EEIELKLALP TSSPSGLAGL AKRLAQTPVL ARRKATRQQL HNIYYDTPGQ 
RLHQKRVALR LRRVGSDANP SWLQTLKMGG RSDSALSQRG EWELPVPGAE LARQALEATP
WSKFDPDGSV FKALAPCIVT TFERTSWSVR KRGGSVVEVS LDIGQVVAGD RRTPICELEL
ELLAGQPAAL FDIARQIARS VAVLPLNASK AERGYALLQD AQSLPLRARP PALTRNMALP
LAAQCVLREM FGQFTSNLNT LTRSDDPEVV HQARVGWRRF RSAWRLFQPA LAAHAAAPAW
QSLEPLLMFV GELRDLDVAL NDTLPPLAAA YTAGNAQREE KWQAMLQALT QAALLQRKSV
RHALQTPAVG ATLLAITQWL EELPASKGPD DAKAGPDISL RRWARQRITR QHKKMKQALK
DTAHPESQHR ARILSKRLRY GIEALRPLLP RRQAERWHAK ATALQTGIGA TRDIMQAGVL
AVRFEADPGL AEFLRGVAAG QPVPR