Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0082 |
Symbol | |
ID | 4686262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 86106 |
End bp | 86903 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639833076 |
Product | hypothetical protein |
Protein accession | YP_980329 |
Protein GI | 121603000 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.236618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAGCA AAGTACCTCC CGACAAGTTT TCACCTGATT TGGGCGATTG GCGTCTGATG ACCGCTGGGT GGATTACTGC CATCAACAAT GTGTCATTGG ACGAGCCGAA GTCTTATCGC GGCAGCACAT GGTTTCAAGA CAAGAATGGC ACCGATGTTT CGTTTCCTAC GCCAAGTGCA GCGGCTCTTC ACTTGAATGC GGCATGGAAG GCGTCCAAGC GTGCACAGGC AATCAAGGAT GGCCTAATGG TTCATCTGTT CAATGCAAAT GGTATGCCGA GTATGCAAGC GTCAGAGGAG CGAATCCCAG CGTTGTTTGA CTACTTCGAA GAAATGATAG CGGTTGCATT CAACAGCTTC GGAGCGATCG AGGCTTTTTG CAACCAGACC GTGGTTGAGA AGGGCGGCAC AGCCGTTACG GTGGTGGTCA AGAAGAAGAT GAAGGTGTCA AAGACACCCG AGGAGATCGA GCGCGAGCAT TCAACCGACG AGAAGCTGGG ACGCATTGTT CCAGAACTCC TCGAAATACG AACTCCTCGG GGAATGGCGA CTTGGGACAC CTATCTGGCC ATAAAGCAAA TCCGCGATGC GGTGACGCAC TTCAAACGCA GGGACCAGAT GCGGCATGCT GACCAGTCAA ACGAACCGAC GGCACTCCTC GCTCTTTACC GAATCGACTG CTTCAAGCTA CCTGAAGATG CAATGAAGGT TCTTCGACAC TTCCAGCCAA TAGGTAGTGT GCAGCGGTGG ATGATGAACC CTGCATGGAA GCGCGATGCG TCCATCCCTG CGGTATAG
|
Protein sequence | MTSKVPPDKF SPDLGDWRLM TAGWITAINN VSLDEPKSYR GSTWFQDKNG TDVSFPTPSA AALHLNAAWK ASKRAQAIKD GLMVHLFNAN GMPSMQASEE RIPALFDYFE EMIAVAFNSF GAIEAFCNQT VVEKGGTAVT VVVKKKMKVS KTPEEIEREH STDEKLGRIV PELLEIRTPR GMATWDTYLA IKQIRDAVTH FKRRDQMRHA DQSNEPTALL ALYRIDCFKL PEDAMKVLRH FQPIGSVQRW MMNPAWKRDA SIPAV
|
| |