Gene Pnap_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0082 
Symbol 
ID4686262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp86106 
End bp86903 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content53% 
IMG OID639833076 
Producthypothetical protein 
Protein accessionYP_980329 
Protein GI121603000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.236618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA AAGTACCTCC CGACAAGTTT TCACCTGATT TGGGCGATTG GCGTCTGATG 
ACCGCTGGGT GGATTACTGC CATCAACAAT GTGTCATTGG ACGAGCCGAA GTCTTATCGC
GGCAGCACAT GGTTTCAAGA CAAGAATGGC ACCGATGTTT CGTTTCCTAC GCCAAGTGCA
GCGGCTCTTC ACTTGAATGC GGCATGGAAG GCGTCCAAGC GTGCACAGGC AATCAAGGAT
GGCCTAATGG TTCATCTGTT CAATGCAAAT GGTATGCCGA GTATGCAAGC GTCAGAGGAG
CGAATCCCAG CGTTGTTTGA CTACTTCGAA GAAATGATAG CGGTTGCATT CAACAGCTTC
GGAGCGATCG AGGCTTTTTG CAACCAGACC GTGGTTGAGA AGGGCGGCAC AGCCGTTACG
GTGGTGGTCA AGAAGAAGAT GAAGGTGTCA AAGACACCCG AGGAGATCGA GCGCGAGCAT
TCAACCGACG AGAAGCTGGG ACGCATTGTT CCAGAACTCC TCGAAATACG AACTCCTCGG
GGAATGGCGA CTTGGGACAC CTATCTGGCC ATAAAGCAAA TCCGCGATGC GGTGACGCAC
TTCAAACGCA GGGACCAGAT GCGGCATGCT GACCAGTCAA ACGAACCGAC GGCACTCCTC
GCTCTTTACC GAATCGACTG CTTCAAGCTA CCTGAAGATG CAATGAAGGT TCTTCGACAC
TTCCAGCCAA TAGGTAGTGT GCAGCGGTGG ATGATGAACC CTGCATGGAA GCGCGATGCG
TCCATCCCTG CGGTATAG
 
Protein sequence
MTSKVPPDKF SPDLGDWRLM TAGWITAINN VSLDEPKSYR GSTWFQDKNG TDVSFPTPSA 
AALHLNAAWK ASKRAQAIKD GLMVHLFNAN GMPSMQASEE RIPALFDYFE EMIAVAFNSF
GAIEAFCNQT VVEKGGTAVT VVVKKKMKVS KTPEEIEREH STDEKLGRIV PELLEIRTPR
GMATWDTYLA IKQIRDAVTH FKRRDQMRHA DQSNEPTALL ALYRIDCFKL PEDAMKVLRH
FQPIGSVQRW MMNPAWKRDA SIPAV