| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0077 |
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| Symbol | |
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| ID | 4687681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 80771 |
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| End bp | 81925 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833071 |
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| Product | twitching motility protein |
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| Protein accession | YP_980324 |
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| Protein GI | 121602995 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTGC CCGCCCAAGC CGCCCCATCC CCGTCCCCAT CCCCGTCCGA TCCCGATGAC
CTCGGGCGCT ACCTGGCGCT GATGGTCGCC CACGGCGCAT CCGACCTTTT CCTGTCGGCT
GAGGTGGCCG CCTCGCTCAA GATCCAGGGC CGCATCCGCC GCCTGCCCGA GCCGCCGCTG
ACGGGAACCC ACATCAAGCG CCTGGCGTAT TCGGTGATGC GCGACAGCCA GGTTCGCGAG
TTCGAGGCCG ATCTGGAGTG CGACCTGGCG ATTGCCATGG ATGCGCTGGG CCGCTTTCGC
GTCAATGTGT TCCGCCAGCG CGGCGAGGTG GCGGTGGTGG TGCGGCACAT CAACAGCACG
ATCCCGACGC TCGAATCGCT GAAGCTGCCG CCGGTGCTGA AAACGCTGGC CATGCTCAAG
CGCGGCCTGG TGCTGGTGGT CGGCGCGGCC GGCTCGGGCA AATCGACCAC GCTGGCGGCC
ATGCTGGACT ACCGCAACAA CATGGCCAGC GACCACATCC TGACGGTGGA AGACCCGATG
GAGTTCGAGC ACAGCCATAA GAAATGCATC GTTGATCAGC GCGAGGTCGG GCTGGACACG
CGCTCTTTCG ACGAAGCGCT GCGCCGCGCC ATGCGCGAAG CGCCCGACGT GATCATGATC
GGTGAAATCC GCGACCGCGA AACCATGCAG CACGCCATGG CCTATGCCGA AACCGGCCAC
CTGTGCGTCT CGACCCTGCA TGCCAACAAT GCCAACCAGG CCATCCAGCG CGTGCTGAAT
TTTTTCCCGG AAACCGCGCA GCGCCAGGTG CTGATGGACC TGTCGCTCAA CCTCAAGGGC
GTCGTCGGCC AGCGCCTGCT GGCAGGCGCG GCCGGCAAAC GGGTTCCGGC GGTCGAGGTG
ATGCTGCTGT CGCCCTATGT CGCCGATTTG ATCCAGAAGG GCCAGACCGA CGAGATCAAG
GCGGTGATGG CCAAGAGCGT CGAGCTGGGC ATGGCCACCT TCGACCAGTC GCTGTACGAG
CTGTACGTGC GCGGCGACAT CACGCACGAG CAGGCCATCG AGCATGCCGA CTCGAAAACC
GACCTGTCGC TGCGCATCCG GCTGGCGTCC GGGCGCCGCC CCGACACCGA AGCCCTGCAG
GTGCTGCGCG ACTGA
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| Protein sequence | MPLPAQAAPS PSPSPSDPDD LGRYLALMVA HGASDLFLSA EVAASLKIQG RIRRLPEPPL
TGTHIKRLAY SVMRDSQVRE FEADLECDLA IAMDALGRFR VNVFRQRGEV AVVVRHINST
IPTLESLKLP PVLKTLAMLK RGLVLVVGAA GSGKSTTLAA MLDYRNNMAS DHILTVEDPM
EFEHSHKKCI VDQREVGLDT RSFDEALRRA MREAPDVIMI GEIRDRETMQ HAMAYAETGH
LCVSTLHANN ANQAIQRVLN FFPETAQRQV LMDLSLNLKG VVGQRLLAGA AGKRVPAVEV
MLLSPYVADL IQKGQTDEIK AVMAKSVELG MATFDQSLYE LYVRGDITHE QAIEHADSKT
DLSLRIRLAS GRRPDTEALQ VLRD
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