Gene Pnap_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0076 
Symbol 
ID4688589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp79407 
End bp80693 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content65% 
IMG OID639833070 
Producturacil-xanthine permease 
Protein accessionYP_980323 
Protein GI121602994 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGC TGGACTGGAC GGAAAAAAGC AGCGCGGTGC TGCGGCAGGG CGGGGTCATC 
GGGCCGGACG AGCGGCTGCC CTGGCCGCAA ACGGCACTCA TGGGCGTGCA GCATGTGATT
GCGATGTTCG GCTCGACAGT GCTGGCGCCG CTGCTGATGG GCTTCGATCC CAACATTGCC
ATCTTGATGA GCGGCATCGG CACGCTGATC TTTTTTGCCG TCACCGGCGG CAAGGTGCCC
AGCTACCTCG GTTCGAGCTT TGCCTTCATC GGCGTGGTGA TCGCCGCCAC CGGCTATGCC
GGCAAGGGGC CGAATGCGAA TATTGGCCTG GCGCTGGGCG GCATCATCGC CTGTGGCGCG
GTCTATGCGG CCATCGGCGC GCTGGTGCAG GCGGTCGGCA CGCGCTGGAT CGAGCGCTTC
ATGCCGCCGG TGGTCACCGG CGCCGTGGTG GCGGTCATCG GCCTGAACCT GGCCAGCATC
CCGGTCAAGA ACATGGCGGC CAGCAACTTT GACGCGTGGA TGCAGGTCGT CACCTTCGTC
AGCGTGGCGC TGGTGGCGGT GCTGGCGCGC GGCATGCTGC AGCGCCTCCT GATTCTGATC
GGGCTGATCG CCTCGTCGCT GGTCTATGCG CTGCTGACCA ACGGCCTGGG GCTGGGCAAG
CCGATTGACC TCTCCAGCAT GGCGAAGGCG GACTGGTTCG GCATGCCGGG CTTCACCACC
CCGGTGTTCA GCACCAGCGC CATGCTGCTG ATCGTTCCGG TGGTCATCAT TCTGGTCGCC
GAAAACCTCG GCCATATCAA GGCGGTGACG GCCATGACCG GCAAGAACCT GGACCGCTAC
ATGGGCCGCG CCTTCATCGG CGACGGCGTG GCGACCATGG TGTCTGGCAG CCTGGGCGGC
ACCGGCGTGA CGACCTATGC CGAAAACATC GGCGTGATGG CGGCGACCCG GATTTATTCG
ACTGCGGTGT TTGTGTTCGC CGCGCTGATC GCGGTGGCGC TGGGTTTCAG CCCCAAGTTC
GGCGCGCTGA TCCAGGCGAT TCCGCTGCCG GTGATGGGCG GCGTGAGCAT CGTGGTGTTC
GGCCTGATCG CGGTGGCGGG CGCGAAGATC TGGGTCGATA ACCGGGTGGA TTTTTCGGAC
AACAAGAACC TGCTGGTGGC CGCCATCACG CTGGTGCTGG GCACCGGCGA CTTCACGCTG
AAGTTCGGCC AGTTTGCACT GGGCGGCATT GGCACGGCGA CCTTTGGCGC CATCTTGCTG
CATGCGCTGC TCGACCGCAA GAAATAA
 
Protein sequence
MGMLDWTEKS SAVLRQGGVI GPDERLPWPQ TALMGVQHVI AMFGSTVLAP LLMGFDPNIA 
ILMSGIGTLI FFAVTGGKVP SYLGSSFAFI GVVIAATGYA GKGPNANIGL ALGGIIACGA
VYAAIGALVQ AVGTRWIERF MPPVVTGAVV AVIGLNLASI PVKNMAASNF DAWMQVVTFV
SVALVAVLAR GMLQRLLILI GLIASSLVYA LLTNGLGLGK PIDLSSMAKA DWFGMPGFTT
PVFSTSAMLL IVPVVIILVA ENLGHIKAVT AMTGKNLDRY MGRAFIGDGV ATMVSGSLGG
TGVTTYAENI GVMAATRIYS TAVFVFAALI AVALGFSPKF GALIQAIPLP VMGGVSIVVF
GLIAVAGAKI WVDNRVDFSD NKNLLVAAIT LVLGTGDFTL KFGQFALGGI GTATFGAILL
HALLDRKK