| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0069 |
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| Symbol | |
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| ID | 4688054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 71660 |
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| End bp | 73081 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833063 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_980316 |
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| Protein GI | 121602987 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.881498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CGCTGCCCAA GCACCTGCTC CCCGGAATCC TCCAGCGCGA AACGCCGCAG
GCGCTGATAG CCGCGCTGAA AAACCGCTTT GCCGAGCGCT GCTCGACCGC CCTGGTGGTG
CGCGAACAGC ATGGCCGCGA CGAGTCCTCG TTTGCCGCGC CGCCGCCGGC CGCCGTGGTG
TTTGCCGAAA GCACGCAGGA CGTGGCCGAC GCGGTCAGGC TGGCCGGCCA GTACAGCGTG
CCGGTGATTC CGTTTGGCGT CGGCACCTCG CTCGAAGGCC ACCTGCTGGC CGTGCAGGGT
GGCATCAGCA TCGACGTGAG CCGCATGAAC CGGGTGCTGG CGATCAACCC GGAAGACCTG
ACGGTGACGG TGCAGCCCGG CGTGACGCGC AGGCAGCTCA ATGAAGAAAT CAAGAGCACC
GGCCTGTTCT TTCCCATCGA CCCCGGCGCC GACGCCACGC TGGGCGGCAT GAGCGCCACC
CGCGCCAGCG GCACCAATGC CGTGCGCTAC GGCACCATGC GCGAGAACGT GCTGGCGCTT
GAAGTCGTCA CCGCCAGCGG CGAGATCATC CGCACCGGCA CGCGCGCCAA GAAGTCAGCC
GCCGGCTACG ATTTGACGCG CCTGATGGTC GGCAGCGAAG GCACGCTGGG CGTGATCACC
GAGGTCACGG TCAAGCTCTA CCCGCTGCCC GAGGCAATTT CGGCGGCGGT CTGCTCGTTC
CCGAGCATCG AGGCGGCGGT GCGCACGACC ATCGAGATCA TCCAGTTGGG CGTGCCGATT
GCGCGCGTCG AGCTGATCGA CGCCCACACC GTGCGCATGG TCAACGCCCA CAGCCGGCTT
GCCCTGCGCG AGGAGCCGAT GCTGCTGATG GAGTTCCACG GCACGCCGAA CGGCGTGAAG
GAGCAGGCCG AGCTGGTGCA GGAACTGGCC AGCGGCCACG GCGGCAATGC CTTTGAATGG
GCCAGCACGC CCGAGGAGCG CACGCGGCTG TGGACGGCGC GCCACAACGC CTACTTTGCG
GCCATCCAGA GCAAGCCCGG CTGCCGGGCG ATTTCGACCG ACACCTGCGT GCCGATTTCC
CGCCTGGCCG ACTGCCTGCT CGAATCGGTG GCCGAGGCCG AAGCCAGCGG CATTCCCTAT
TTCCTGGTCG GCCATGTCGG CGACGGCAAT TTTCACTTCG GCTACCTGAT CGACCCCGAC
AACGCCCAGG AGCGCGATGC CGCCGAAGCG CTGAACCACC AGCTCGTGGC CAGAGCCCTG
AGCCTGGAAG GCACCTGCAC CGGCGAGCAC GGCATCGGCC TGGGCAAGAT GGACTTCCTG
CTGAGCGAGA CCGGCGGCGG CGCGGTGGAC ATGATGCGCG CCATCAAGCG CGCGCTCGAC
CCGCAGAACA TCATGAATCC GGGGAAGATT TTTACCCTCT GA
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| Protein sequence | MNAPLPKHLL PGILQRETPQ ALIAALKNRF AERCSTALVV REQHGRDESS FAAPPPAAVV
FAESTQDVAD AVRLAGQYSV PVIPFGVGTS LEGHLLAVQG GISIDVSRMN RVLAINPEDL
TVTVQPGVTR RQLNEEIKST GLFFPIDPGA DATLGGMSAT RASGTNAVRY GTMRENVLAL
EVVTASGEII RTGTRAKKSA AGYDLTRLMV GSEGTLGVIT EVTVKLYPLP EAISAAVCSF
PSIEAAVRTT IEIIQLGVPI ARVELIDAHT VRMVNAHSRL ALREEPMLLM EFHGTPNGVK
EQAELVQELA SGHGGNAFEW ASTPEERTRL WTARHNAYFA AIQSKPGCRA ISTDTCVPIS
RLADCLLESV AEAEASGIPY FLVGHVGDGN FHFGYLIDPD NAQERDAAEA LNHQLVARAL
SLEGTCTGEH GIGLGKMDFL LSETGGGAVD MMRAIKRALD PQNIMNPGKI FTL
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