Gene Pnap_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0058 
Symbol 
ID4689971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp59940 
End bp61100 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content64% 
IMG OID639833052 
Producthypothetical protein 
Protein accessionYP_980305 
Protein GI121602976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.615926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.1354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC AATTCGCTGG AACCTCTTTT ATCTGCGTCA TGGGTGCCAT GTTCAGCTTG 
CCGTCCATTG CACAAGACCT GCACTCCGGC ACGCCGGAAA TACCCCGGAC GTCCTGGATG
CTCAGCGCCA CAGCCAGCGA GGAATCCATC GGCCAGGGAC TGCCCGTACT GGCCCTGGAC
CGTGACGACT GGCCCCGTTA CCGTTCCGGG CAATCCAGCC AGCCGCGCGC CTGGCGCAGC
CTGCAGGCCG AGTTGAGCGC AACCCATCCC GGTGGCTGGC GCTTTGGCGC ACTGGCCCGC
GCCGAAGCGT GGCTGCAAGC CAGCCCCGAT GCGGTCACGG TAGCCGCACT GGACGCCATA
AACTCCAGGC CGGAAACAGC CCGCAGCTAT GACCTGAATG CCAGCAGCCA AAGCTGGCAA
GGCCAGGGTC TGCGAGTCGG CACCCCCTGG CTAAAGCTCG ATGCGGCAGA TCGGTGGCGC
TGGCAAGCCG ATGCGCAGCT GTTGCGGCTG CAGAAATTTC GCACCGTTGA CCTGTCAGGC
AAGCTGTCTT ACCAGAGCAG CGATGTCTAT GACTTCAATG TTCACAGCCA GCGTTCCAAC
CCGAACATCA CCGGCCCTTA CCTGTCGGCG TCAGGCCGTT CTGGCCTGGG CAGTTCGCTG
TCGGTCGCAG TGCAAGGCGA GCCTGCAGCG GGATGGCAAG TCCAGCTGCG TGCCGACGAC
CTGCTCTCCA GGCTTGACTG GCCCGAACTG GCCACCGACA ACGCCGTGCT CAATTCACAG
GTCACCAGCC GCGCGCCCGA CGGCTCGCTG GACTATGCGC CCCTGATCAA AGGGCAAAAA
ACGCTGAGGC ACATCACACG CCGGATCGGT GTGCATTGGC AGGCGAAAGT CAGCTGGTCG
GCCTTCGGGC CTCAAAGCCA GCCTGGGGCG ATAAGCCTGC AGCTGGATCG CAGGGCCGGG
CTTAACCAGG CCTGGCTCGG CTGGGACAGC GGCGACGCCG GACGCAGCAG GCCACGCTGG
AGTCTGGCGA TTGAACCGGT CCGGCGAGTC GCCAGCCTAG GGCTTGGCTG GCATGGCTGG
CAGGCTTTAC TGGCAACCGA TGGCAAAGGC ACAAACTCCG AATTCAGGTA TTTGCGCCTG
GGCTGGCAAG GCGAGTTTTA A
 
Protein sequence
MTNQFAGTSF ICVMGAMFSL PSIAQDLHSG TPEIPRTSWM LSATASEESI GQGLPVLALD 
RDDWPRYRSG QSSQPRAWRS LQAELSATHP GGWRFGALAR AEAWLQASPD AVTVAALDAI
NSRPETARSY DLNASSQSWQ GQGLRVGTPW LKLDAADRWR WQADAQLLRL QKFRTVDLSG
KLSYQSSDVY DFNVHSQRSN PNITGPYLSA SGRSGLGSSL SVAVQGEPAA GWQVQLRADD
LLSRLDWPEL ATDNAVLNSQ VTSRAPDGSL DYAPLIKGQK TLRHITRRIG VHWQAKVSWS
AFGPQSQPGA ISLQLDRRAG LNQAWLGWDS GDAGRSRPRW SLAIEPVRRV ASLGLGWHGW
QALLATDGKG TNSEFRYLRL GWQGEF