Gene Pnap_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0048 
Symbol 
ID4689339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp48364 
End bp48840 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content62% 
IMG OID639833042 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_980295 
Protein GI121602966 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.146084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG TGTTGCACAT CAACCCTGAA AAATGCACCG GCTGCCTGCA GTGCGAAATG 
GCTTGTTCCT TCGACAACTA CGGCGTCTTC GCCCCCGCCA AGTCGCGCAT CAAGGTCTTC
GACTTCCACG ACACCGGCAA GAAGGTGCCC TACACCTGCA CCCAGTGCGA CGAGGCCTGG
TGCCTGCATG CCTGCCCGGT GGAAGCCATC ACGCTGGACA AGCTGACCGG CGCCAAGGTG
GTCAACGACT CCACCTGCGT CGGCTGCAAG GTCTGCACCA TCGCCTGCCC GTTCGGCACC
ATCAACTATG TACAGGAAAC CGGCAAGGTG CAAAAGTGCG ACCTGTGCGG TGGCGAGCCG
GCCTGCGCCG AAGCCTGCCC GACCGGCGCC ATCACCTTCA TCGACGCCAA CTGGACCGGC
CTGGGCCGGA TGCAGCAATG GGCTGACAAG CTGGGCAACC AGCCTTCGGC CAGTTAA
 
Protein sequence
MQKVLHINPE KCTGCLQCEM ACSFDNYGVF APAKSRIKVF DFHDTGKKVP YTCTQCDEAW 
CLHACPVEAI TLDKLTGAKV VNDSTCVGCK VCTIACPFGT INYVQETGKV QKCDLCGGEP
ACAEACPTGA ITFIDANWTG LGRMQQWADK LGNQPSAS