Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0047 |
Symbol | |
ID | 4689334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 47101 |
End bp | 48171 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639833041 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_980294 |
Protein GI | 121602965 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.108972 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGCAT CAGCCCCTTA CCACTCAGTA GTTTCCCTAG GATTCATGAC ACCAGCCCGC CTTCGCCCCC GCGCCACCGG CCGCGTTACC CTGACCGACG TGGCGCAAGC CGCCGGCGTC AGCCCGATCA CCGTGTCGCG CGCGCTGCGC GGCGAGCGCG CCGTCGATCC GGCGCTGGTC GAGCGCGTGC AGGCGGCGGC GCGCTCGCTG GGTTATGTGC CCGACCCGGC GGCGCGCGCG CTGGCGTCGC AGCGCAGCTC GCACGTCGCG GTGCTGATTC CGATGCTGTC GAACGCCTTG TTCGTCGATC TGCTCGAAGC CGTGCAGCGC AGCCTGCGCC CGGCCGGCTA CCAGACGCTG ATGGGCGTGA CGCACTACAA CGCCGACGAG GAGGAGCAAC TGCTGCGCGA GCAACTGCTG CAGCGCCCGG CTGGCCTGGT CGTGACCGGG CTTGAACGCA GCGACGCCGC GCGCGCGCTG ATTGCGCAAA GCGGCGTGCC CTGCGTGCAT GTGATGGAAA TGTCCAGCGT GCCCGGCGTG TACAGCGTCG GCTTTTCGCA GGCCGATGCG GGGGCCGAAC TGACGCGGCA TTTGCTGGCG CGCGGCCGCC GGCGCATCGC CTTCGTGGCC GCGCAGCTCG ATGCGCGAAC GCTGCAGCGG CTCGAAGGCT GGCGCCGCGA ACTGCTGGCT GCCGGCTTGC ACGATCCGGC GCTCGAATGG CTGGACCCGG CGCCGTCATC GATTGCGCTG GGCGCGCGCC TGTTCGAGCG GATCATCGGC GAGCAGCCCG ACGTGGACGC GGTGTTCTTC TGCAATGACG ACCTGGCGCA GGGCGCCTTG CTGGCGGCGC TGCGCCTGGG CGTTGCGGTG CCGGAGCGCG TGGCGGTGGC CGGCTTCAAC GACCTGACCG GCAGCGACCA GATGCTGCCG CCCTTGACCA CGGTGCGCAC GCCGCGCAGC GAAATCGGCC ACGCCGCCGC GCGCATGCTG CTGGCGCTGA TGAACGGCGA GACCGTGGCC TCGCCCTGCG TCGATCTGGG TTACGAGCTG GTGGTGCGGG CCAGCACCTG A
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Protein sequence | MRASAPYHSV VSLGFMTPAR LRPRATGRVT LTDVAQAAGV SPITVSRALR GERAVDPALV ERVQAAARSL GYVPDPAARA LASQRSSHVA VLIPMLSNAL FVDLLEAVQR SLRPAGYQTL MGVTHYNADE EEQLLREQLL QRPAGLVVTG LERSDAARAL IAQSGVPCVH VMEMSSVPGV YSVGFSQADA GAELTRHLLA RGRRRIAFVA AQLDARTLQR LEGWRRELLA AGLHDPALEW LDPAPSSIAL GARLFERIIG EQPDVDAVFF CNDDLAQGAL LAALRLGVAV PERVAVAGFN DLTGSDQMLP PLTTVRTPRS EIGHAAARML LALMNGETVA SPCVDLGYEL VVRAST
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