| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0045 |
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| Symbol | |
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| ID | 4689332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 45944 |
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| End bp | 46456 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833039 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_980292 |
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| Protein GI | 121602963 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.325039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG AAACCCTGAT CGAAGCGCCG AAAAGCCGCT TCCAGCGCAT CAGCAACCTG
CTGCTGGCCA TCTGCCTGGG CGTGATGGCC GTGGCGGTGT TCGTCAACGT CGTGCTGCGC
TACGGCTTTG GCAGCGGCGT TCCGGCCAGC GAAGAGCTGT CGCGCCTGCT GTTCGTCTGG
ATGGTGTTCA TCGGCGCGAC CGCCGCCTAC CCGGCCGGCG AGCACATGGC CTTCACCAGC
CTGGTGGGCC TGCTGAAAAA CCAGCCCCGC CTCATGCTGG CCATGACGAT TTTCATCCGC
CTGCTGGTGC TGCTGGGCTG CGCGCTGATC GGCTGGGGCG CCTGGCAACA GGTCGTCGTC
GGGCTGGACA GCCATTCGGT GGTGCTGAAC TACCCGACCG CGCTGCTGCC GCTGCCGGCC
TTTTTGTGCG CCACGGCCAT CGGCCTGATG GCGCTGTTCG AGATCATCAA CCGCACGCCG
CTGGACCTCG GCCACGGCGC GGAAGTGGAG TAA
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| Protein sequence | MTTETLIEAP KSRFQRISNL LLAICLGVMA VAVFVNVVLR YGFGSGVPAS EELSRLLFVW
MVFIGATAAY PAGEHMAFTS LVGLLKNQPR LMLAMTIFIR LLVLLGCALI GWGAWQQVVV
GLDSHSVVLN YPTALLPLPA FLCATAIGLM ALFEIINRTP LDLGHGAEVE
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