| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0042 |
|---|
| Symbol | |
|---|
| ID | 4689774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 43159 |
|---|
| End bp | 43542 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639833036 |
|---|
| Product | methylglyoxal synthase |
|---|
| Protein accession | YP_980289 |
|---|
| Protein GI | 121602960 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1803] Methylglyoxal synthase |
|---|
| TIGRFAM ID | [TIGR00160] methylglyoxal synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.304097 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CCCTCATTGC CCACGATCAT AAAAAAGACG ACATCGTCCT GCTCGCCCGG
GAGTTCACGC CCTTTCTTTC GGCTTGCCAG CTGATGGCGA CCGGCACCAC CGGGCGCCGG
CTCCATGACG AGGCGGGCCT GACGGTCGAG TGCCTGCTCA GCGGCCCGTT CGGCGGCGAC
CTGCAGATCG GCGCCCGGCT GGCCGTCGGC GACGTGGACG TGGTGGTCTT TCTGCGCGAC
CCCATGACCG CCCAGCCGCA CGAGCCGGAC ATCAATGCGC TGGTTCGCGC CTGCGACGTG
CACAACGTGC CCTGCGCCAC CAATCTGGCC GGCGCGCGCA TCCTGCTCAG GGGACTGATC
CTGCAGGGTT GCGTTCACCC TTGA
|
|---|
| Protein sequence | MKIALIAHDH KKDDIVLLAR EFTPFLSACQ LMATGTTGRR LHDEAGLTVE CLLSGPFGGD
LQIGARLAVG DVDVVVFLRD PMTAQPHEPD INALVRACDV HNVPCATNLA GARILLRGLI
LQGCVHP
|
|---|
| |