| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0041 |
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| Symbol | |
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| ID | 4689989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 41693 |
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| End bp | 42709 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639833035 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_980288 |
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| Protein GI | 121602959 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.487407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTC ATTTCTTCTC GCTTTTCACG ATTTCTCATG CGTTCAAGCG CAGTGTCGCC
GGCGCCTGCC TGGTGCTGGC AGGCGTGGGT GCGGCCAGCG TGCCGATGCC TGCAGCGGCC
GAAGTCAAGG TCGGCGTGTC CGACTGGCCA GGCTGGGTGG CCTGGTACGT GGCCGAGCAA
AAAGGCTTTT TCAAGAAGAA CGGCGCCGAC GTCAAGCTCG TCTGGTTTGC CAACTACACC
GATTCCATCG GCGCGCTGTC CTCGGGCCAG CTCGACGCCA ACTCCCAGAC CTGGTCCGAC
ACGCTCGGCC CCCTGGCCAA GGGCCTGCCG CTCAAGGCGA TTCTGGTCAA CGACAACTCG
GCCGGCAACG ACGCGCTGAT GGTCGGCCCG AAGATCACCT CCTTCGCCCA GCTCAAGGGC
AAGAAAGTGG CGCTGGAGCA ATTCAGCATT TCGCACTTCG TGCTGGCCAC GGCGCTGGCC
AAGAACGGCA TGAAGCTCGA TGACGTGAAG ATCGTCAACC TGTCCGCCGG CGACGCCGCC
GCCGCCTTCA TCAGCGGCAA GGTCGATGCC GCCGTGCTGT GGAACCCCTG GGTGAACCAG
ATCGAAAAAA GCGGCAAGGG CAAGGCCTTG TTCACCTCCA GGGACATGCC CGGCCTGGTG
CCCGACTTGC TGGTGGCCCA GGACAAGGCC ATCCAGACCA AGCGCAAGGA GCTGGTCGGC
ATGATCAAGG CCTGGTTCGA GACCGAAAAG TTCATCCGCG AGCAACCCGC CGAAGCCGCC
AAAATCATGT CCAAGGTGGT CAGCATGTCG CCCGAGGAAT ACACCGTGTT CCTGCCCGGC
ACCAGGTTCT TCGACGCCGC CGCCAACACC CGTGCTTTTG ACGCCAAACA GGCGCTGTCG
CTGTCCAGCA CCGCGCCCAC CATCGCTGCC TTTTTGACCC AGTACAAGCT GATCGAAGGC
AAGCCTGATG CCGCCAAGGG CATTGACGGC ACGCTGCTGC AAGACGCGTT GAAGTAA
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| Protein sequence | MSSHFFSLFT ISHAFKRSVA GACLVLAGVG AASVPMPAAA EVKVGVSDWP GWVAWYVAEQ
KGFFKKNGAD VKLVWFANYT DSIGALSSGQ LDANSQTWSD TLGPLAKGLP LKAILVNDNS
AGNDALMVGP KITSFAQLKG KKVALEQFSI SHFVLATALA KNGMKLDDVK IVNLSAGDAA
AAFISGKVDA AVLWNPWVNQ IEKSGKGKAL FTSRDMPGLV PDLLVAQDKA IQTKRKELVG
MIKAWFETEK FIREQPAEAA KIMSKVVSMS PEEYTVFLPG TRFFDAAANT RAFDAKQALS
LSSTAPTIAA FLTQYKLIEG KPDAAKGIDG TLLQDALK
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