Gene Pnap_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0031 
Symbol 
ID4687160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp29940 
End bp31055 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content68% 
IMG OID639833025 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_980278 
Protein GI121602949 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.371979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTT TATTCGACAC CGTCCAGGCC GGCGACCTGC AGCTTGCCAA CCGCATCGTG 
ATGGCGCCGC TGACGCGCAA CCGCGCGCCC GATGCCATTC CCACGCCGCT GATGGCCGAA
TACTACGCCC AGCGCGCCAC GGCCGGCCTC CTGATCACCG AAGCCACGGC CATCAGCCAC
CAGGCGCAGG GCTATGCCGA CGTGCCCGGC CTGTACGGCA CCGAGCAGCT CGACGGCTGG
AAGCGCGTGA CCGGGGCGGT GCATGACGCG GGCGGAAAAA TCGTGGTGCA GCTCTGGCAT
GTGGGCCGCG TCTCGCACAA TGAACTGCAG CCCGATGGCG GCAAGCCGGT CGCGCCTTCG
GCCATCACCG CCAGGACCAA GACCGTGCTC ATCAAGGACG GCCTGCCCGT CTTCGTGCCG
ACTTCAGAAC CCCGCGCGCT CGACGCCGAA GAGCTGCCCG AGATCGTCCA CACCTACCGC
GCCGCCGCGC TCAATGCGGT GCTCACGGCC GGCTTTGACG GCGTCGAGAT CCACGGCGCC
AACGGCTACC TGCTCGACCA GTTCCTCAAG AACGGCTCCA ACCAGCGCAC CGACGACTAC
GGCGGTCCCA TCCGCAACCG CGCCCGCCTG CTGCTCGAAG TCACGCGCGC CATCGTCGAT
GCGATTGGCG GCGGCCGCAC CGGCATTCGC CTGTCGCCGG TCACGCTGTC CAACGATGCG
TTTGACAGCG ACCCGCAGCC GCTGTTCGAG CATGTGGTCA AGCAGCTGGC CAGGCTGGAC
CTGGCCTACC TCCACATCAT CGAAGGCGCC ACCGGCGGCG CGCGCGACCT GCCCGAGCGT
CCGTTCGACT ACGCGGCGCT CAAGGCGGCT TACCGCGCAG CCGGCGGCAA AGGCGCCTGG
ATGGTCAACA ACGGCTACGA CAAGGCCATG GCCGAGCAGG CCGTGAAGGA CGGCGCCGAC
CTGGTCGCCT TCGGCAAACC GTTCATCGCC AACCCGGATC TGGTGCACCG CCTGCGCAGC
AACGCGCCGC TCAACCAGCC CGACCCGGCG ACGTTTTACG GCGGCGGCGC CGAAGGCTAC
ACCGACTACC CGGACTATGA AGAGCTGGTG AACTGA
 
Protein sequence
MPSLFDTVQA GDLQLANRIV MAPLTRNRAP DAIPTPLMAE YYAQRATAGL LITEATAISH 
QAQGYADVPG LYGTEQLDGW KRVTGAVHDA GGKIVVQLWH VGRVSHNELQ PDGGKPVAPS
AITARTKTVL IKDGLPVFVP TSEPRALDAE ELPEIVHTYR AAALNAVLTA GFDGVEIHGA
NGYLLDQFLK NGSNQRTDDY GGPIRNRARL LLEVTRAIVD AIGGGRTGIR LSPVTLSNDA
FDSDPQPLFE HVVKQLARLD LAYLHIIEGA TGGARDLPER PFDYAALKAA YRAAGGKGAW
MVNNGYDKAM AEQAVKDGAD LVAFGKPFIA NPDLVHRLRS NAPLNQPDPA TFYGGGAEGY
TDYPDYEELV N