| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0020 |
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| Symbol | |
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| ID | 4687095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 18854 |
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| End bp | 19921 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639833014 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_980267 |
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| Protein GI | 121602938 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.504997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAC CCATGAACTC CCTTCACATC GGCATTGCCG GCGCCGGCCT GGCCGGCCGC
ACGCTGGCCT GGCGGCTGCT GCGCGCGGGC TGCCGCGTCA CTTTGTTCGA TTCGCGCCAG
CGCGCCGAAC TGGACACCGC TTCGATGACC GCAGCGGCCA TGCTGTCGCC GCTGGCCGAA
CTGTCGGTAT CAGACGAAGT GGTGTTTCAG TTGGGCCGGC GCTCGATGGA GTTATGGCCG
CGCTGGGTCG CCGAACTGGC CGAGGGCGGC GGCGAGCCAG TGTATTTCCG CCAGAAAGGC
ACGCTGGTCG TGGCGCACGC GCCTGACCAG AGTTCGCTCG ACCACTTCAG CGGCCTGTTG
CACCACCGGC TGCCCGAGGC CTGCCGCGCC GAGGTGCACA CGCTGGACGC GGCCGCGCTG
GCGCAGCGCG AGCCGGCGCT GGCCGGGCGC TTTGGCGGCG GCCTGTTCCT GGAGAGCGAA
GGCCAGCTGG CCAATGACCA GTGGATGGCC GTGCTGGGCC GGGAGATCGA CCGGCTCGGC
GTGACCTGGC ATGAAGGCCA GGCGGTTGAC CGGGTGGAAG AGGGGCGCAT CATTTGCGCC
AGCGGCGAAT ACGCAGTGGA TGTGGCGGTC GATGCGCGCG GCGTGGGCAG CAAGGCGCAG
TGGCCGCAGC TACGCGGCGT GCGCGGCGAG GTGCTGCGCG TCGAATGCCA CGGCGTGACT
TTGCAGCGCC CGGTGCGGCT GATGCATCCG CGCTACGCGC TCTACGTCGC GCCCCGGCCC
GACCACCAGT TCGTCGTCGG CGCGACCGAA CTCGAATCGG AAGACACCGG CCCGGTCACG
CTGCGTTCAA CGCTGGAGCT GGGCAGCGCG CTGTACAGCC TGCACCCGGC CTTTGGCGAG
GCGCGCGTGC TGCGGCTGTC GGCCGCGCTG CGTCCGGCGC TGGACGACCA CCGGCCGGCC
GTGGCGCTGC GCGATGGCGT GTGGCACATC AACGGCCTGT ACCGGCATGG CTATTTGTGC
GCGCCGGCGG TGGTCGATGA ACTGGCCCAT AAACTGTTGG CAACATGA
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| Protein sequence | MHSPMNSLHI GIAGAGLAGR TLAWRLLRAG CRVTLFDSRQ RAELDTASMT AAAMLSPLAE
LSVSDEVVFQ LGRRSMELWP RWVAELAEGG GEPVYFRQKG TLVVAHAPDQ SSLDHFSGLL
HHRLPEACRA EVHTLDAAAL AQREPALAGR FGGGLFLESE GQLANDQWMA VLGREIDRLG
VTWHEGQAVD RVEEGRIICA SGEYAVDVAV DARGVGSKAQ WPQLRGVRGE VLRVECHGVT
LQRPVRLMHP RYALYVAPRP DHQFVVGATE LESEDTGPVT LRSTLELGSA LYSLHPAFGE
ARVLRLSAAL RPALDDHRPA VALRDGVWHI NGLYRHGYLC APAVVDELAH KLLAT
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