Gene Pnap_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0018 
Symbol 
ID4687093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp15738 
End bp16397 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID639833012 
Producthypothetical protein 
Protein accessionYP_980265 
Protein GI121602936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.463988 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTC TGTCGGAACT GAAAAGCCGG GCCAATGCGC TGCAGGGCCT GCAGCTCGGC 
GCGCAGCGCG ACCTCGTGGC CGGCACCCAG GCCTGCGAAG TGGCCTGCCG GATGGCGCTG
GTGTATTTGC AGGACTTGTG CGCCCAGCTC AACGTCATCC AGCCGCCCGC GCCAGGCGTC
TACAGCCTGG ACGGCAAGGC GCCGTTTGCT GGATCCGCGG CGCTGGTGCA GCGCAACTTC
CGCTGCGACG CGCGCCGCAA GATGCTGCGC AATGCGGAGG TTTTCGACTA CATCGGCGTT
GGCTGGGACT TGCTGCCCGT CACCGGACTG GTGGCGACCC ACACGGTCAC CGTCAACTTT
CCGCCCGACC TGGAGCGCGT GACGCAGCGC CTGTCCGTCG GGCAGATCCA GCACGAACGC
AAGGACCAGC GCCACCCCGA GACCAACAAG CTGCTGGCCT ATGTGTTCGA CTACCAGACC
GAGTCGCGCG CCTTCATCAC GCTGACGCCC GACCATGACA CCGGCTGCAT CGCCTTTCGC
GTGAGCAACG TGGGCGGCTT TGGCGTACAC AACACCAGCT ATCCGGGGGC GCAGGTCACG
CACAGGCTGC TTGACGAGCT GGCCAAGAAG CTGGTCGGCC AGCCCAGCCG TTTCGGCTGA
 
Protein sequence
MSFLSELKSR ANALQGLQLG AQRDLVAGTQ ACEVACRMAL VYLQDLCAQL NVIQPPAPGV 
YSLDGKAPFA GSAALVQRNF RCDARRKMLR NAEVFDYIGV GWDLLPVTGL VATHTVTVNF
PPDLERVTQR LSVGQIQHER KDQRHPETNK LLAYVFDYQT ESRAFITLTP DHDTGCIAFR
VSNVGGFGVH NTSYPGAQVT HRLLDELAKK LVGQPSRFG