Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0018 |
Symbol | |
ID | 4687093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 15738 |
End bp | 16397 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639833012 |
Product | hypothetical protein |
Protein accession | YP_980265 |
Protein GI | 121602936 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.463988 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTC TGTCGGAACT GAAAAGCCGG GCCAATGCGC TGCAGGGCCT GCAGCTCGGC GCGCAGCGCG ACCTCGTGGC CGGCACCCAG GCCTGCGAAG TGGCCTGCCG GATGGCGCTG GTGTATTTGC AGGACTTGTG CGCCCAGCTC AACGTCATCC AGCCGCCCGC GCCAGGCGTC TACAGCCTGG ACGGCAAGGC GCCGTTTGCT GGATCCGCGG CGCTGGTGCA GCGCAACTTC CGCTGCGACG CGCGCCGCAA GATGCTGCGC AATGCGGAGG TTTTCGACTA CATCGGCGTT GGCTGGGACT TGCTGCCCGT CACCGGACTG GTGGCGACCC ACACGGTCAC CGTCAACTTT CCGCCCGACC TGGAGCGCGT GACGCAGCGC CTGTCCGTCG GGCAGATCCA GCACGAACGC AAGGACCAGC GCCACCCCGA GACCAACAAG CTGCTGGCCT ATGTGTTCGA CTACCAGACC GAGTCGCGCG CCTTCATCAC GCTGACGCCC GACCATGACA CCGGCTGCAT CGCCTTTCGC GTGAGCAACG TGGGCGGCTT TGGCGTACAC AACACCAGCT ATCCGGGGGC GCAGGTCACG CACAGGCTGC TTGACGAGCT GGCCAAGAAG CTGGTCGGCC AGCCCAGCCG TTTCGGCTGA
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Protein sequence | MSFLSELKSR ANALQGLQLG AQRDLVAGTQ ACEVACRMAL VYLQDLCAQL NVIQPPAPGV YSLDGKAPFA GSAALVQRNF RCDARRKMLR NAEVFDYIGV GWDLLPVTGL VATHTVTVNF PPDLERVTQR LSVGQIQHER KDQRHPETNK LLAYVFDYQT ESRAFITLTP DHDTGCIAFR VSNVGGFGVH NTSYPGAQVT HRLLDELAKK LVGQPSRFG
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