Gene Pnap_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0008 
Symbol 
ID4687083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp6920 
End bp7735 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID639833002 
Productseptum site-determining protein MinD 
Protein accessionYP_980255 
Protein GI121602926 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.27938 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA TCATTGTGGT CACCTCCGGC AAGGGCGGCG TCGGCAAAAC CACCACCAGC 
GCCAGCTTTG CAACCGGCCT GGCCCTGCGT GGCCACAAAA CCGCCGTGAT CGACTTTGAC
GTCGGCCTGC GCAACCTGGA CCTGATCATG GGCTGCGAGC GCCGCGTGGT GTACGACCTG
ATCAACGTCA TCCAGGGCGA AGCCACGCTC AACCAGGCCC TCATCAAGGA CAAGCAGTGC
CCCGAACTGT TCGTGCTGGC CGCCTCGCAA ACCCGCGACA AGGACGCACT GACCATCGAC
GGCGTCAAGA AAGTGCTCGA TGACCTGGCG GCGATGGACT TTGAGTACAT CGTCTGCGAC
TCGCCCGCCG GCATCGAGAC CGGCGCGCTG ATGGCGATGC ATTTCGCCGA CGAAGCGCTG
GTCGTCACCA ACCCCGAAGT GTCCTCGGTG CGCGACTCCG ACCGCATCCT GGGCATGCTG
TCGAGCAAGA CCCAGCGCGC CATCGACGGC GGCGAGCCGA TCAAGGAGCA CCTGCTCATC
ACCCGCTACA ACCCCAGCCG CGTCGATCAG GGCCAGATGC TGTCGCTCGA AGACATCCAG
GACATCCTGC GCATCAAGCT GATCGGCGTC ATTCCCGAAT CCGAAACCGT GCTGCAGGCG
TCCAATCAGG GCGTGGCGGC GGTGCACATG CAAGGCACCG ACGTGTCCGA AGCCTACAAG
GACGTGATCG ACCGCTTCAT GGGCGAGGAC AAGCCGATGC GCTTCATCGA CGCGCAAAAG
CCCGGTTTCT TCAAACGCCT GTTCGGGGGA AAGTAA
 
Protein sequence
MAKIIVVTSG KGGVGKTTTS ASFATGLALR GHKTAVIDFD VGLRNLDLIM GCERRVVYDL 
INVIQGEATL NQALIKDKQC PELFVLAASQ TRDKDALTID GVKKVLDDLA AMDFEYIVCD
SPAGIETGAL MAMHFADEAL VVTNPEVSSV RDSDRILGML SSKTQRAIDG GEPIKEHLLI
TRYNPSRVDQ GQMLSLEDIQ DILRIKLIGV IPESETVLQA SNQGVAAVHM QGTDVSEAYK
DVIDRFMGED KPMRFIDAQK PGFFKRLFGG K