| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0005 |
|---|
| Symbol | |
|---|
| ID | 4687080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 5033 |
|---|
| End bp | 5608 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639832999 |
|---|
| Product | NnrU family protein |
|---|
| Protein accession | YP_980252 |
|---|
| Protein GI | 121602923 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4094] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.977134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.174949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATGC TGATTCTGGG GCTGGTTCTT TTTCTGGGCG TGCATTCGAC GCGCATCGTG
GCCGATGGCT GGCGTACGGC CATGATCGGG CGTCTGGGCG AAAAGCGCTG GAAGGGCCTG
TACGCGCTGG TCTCGCTGGT TGGTTTCGGA CTGGTGATCT GGGGTTTTGG CCTGGCGCGG
CAGCAGCCGG TGCAGTGGTG GGCGCCGCCG TTTGCCACGC GCCATCTGGC CTGGCTGCTG
ACGGCGCTGG CTTTCATTTT GCTGGCGGCC GCCTATGTGC CGCGCAACGC CATCAAGGCG
CGGCTGCACC ATCCGATGGT GCTGGGCGTG ATGTTCTGGG CCGTGGCGCA TCTGCTGGCC
AACGGCAACC GGGCGCATGT GCTGCTGTTT GGCAGTTTCC TGGTGTGGGC GGGGCTGAGC
TTTCGCGCGG CACGGGCACG CGACCGGGCC GCGCTGGCCG TCTATCCGGC GGGGACGGCT
TCGGGAACGC TGATGGCCGT GCTGGCCGGC ATGGCCGCCT GGGCCGTGTT TGCGTTCTGG
GCGCATGGGC TACTGATCGG CATTCGGCCG GTGTAA
|
|---|
| Protein sequence | MGMLILGLVL FLGVHSTRIV ADGWRTAMIG RLGEKRWKGL YALVSLVGFG LVIWGFGLAR
QQPVQWWAPP FATRHLAWLL TALAFILLAA AYVPRNAIKA RLHHPMVLGV MFWAVAHLLA
NGNRAHVLLF GSFLVWAGLS FRAARARDRA ALAVYPAGTA SGTLMAVLAG MAAWAVFAFW
AHGLLIGIRP V
|
|---|
| |