| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_5026 |
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| Symbol | |
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| ID | 4690240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008771 |
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| Strand | - |
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| Start bp | 12088 |
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| End bp | 14502 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639832967 |
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| Product | CagE, TrbE, VirB component of type IV transporter system |
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| Protein accession | YP_980123 |
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| Protein GI | 121583601 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.451352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGCG CTATTTTAAA AAAACAGTTC GCGGGTGAGG AACAACTGCC CCCGTATAAC
TACCACGTCA GAGACACGAT TGTGTCTCTT GAGGATGGGC GCGTGGCGTT CATTCTCAAG
GCAAAGAGCC TGCCCTTTGA AGTGACCAGC GACAAGGTAT TGGAGAACCA ATACGATGGG
TTGAACGGGC TGCTCCTGAG CATAGCCAAG TCCACCGGCT CGCGCCTGGC AGTGTGGGCA
CACCTCGACC ACTACCAAAC GGAGTTCAAA ACGGACTACC GATTTGGCTA CGAATGGATG
CGCCTTTTCA GTGCCAAGTA CATGGCCAAG TTTGAAGGCA CAGATATTTT CGAGAACGAT
TTTTATCTGA CCTTCATCCT GAAACCGGGC ATGAATGACA ACCTGGAAGA GTGCATTCGT
GAGCTGGAAG AAATTCAGCT CAGTGTGACG CAAACCGTTG CGCCCTATGA ATGCGAAGTG
CTGTCGATGT ACGAGCACGA TGGCAACCAG TTCAGTCAGT TCTACGAGTT CATTGCGTAC
CTGTACAACG GCTTTTGGGA GCGCGTCCCC GTGACCTCGC TCCCGCTGTT TCAGGCAGTG
CAAACAAGCG CTTTGCACCA TGGCTACAAG CTGCTTGAAA CGCGGTTCCC GGACGGTGGC
AACCGCTACA GCGCGTTTTT CGATTTGAAG GACTTCCCGG ATCCCACGAC GCGGGGGAAA
TTCAACCCGC TGCTGGAGCT GCCGTTTCCC TTCATCATGT GCTTGTCGTT CACCTTCATT
AATACGGCTG ACTCCATCCG AATGATTAAC CAGTCGCTGA ACAAAATGGA ATCGGCTGGT
GATGAGGCGG TGGAGCAAAT GGACGATATG AGCCTGGGCA AAGGCGCGAT CATGTCCGGC
CAGGTGTATT TCGGTGAACT GCACGGCGCG TTGGCCGTGT ATGGTAAGAC CGAAAAGCAA
ACCGAAGACC GGGGCGCGAC GGCCCGGACT ACGCTCAGTG GTTCATGCGC GACTCAGTTT
GTGCCCGCCA CCATTTCAGC GCCGGAAACG TTCTTCTCGA TGTTCCCGGG CAACGTCAAA
CGCCGCCCGC GTCCGATGCC CAAAACAACC CGGAATTTGT TGGGTTTGTT CAGCATGAAC
ACCTACAGCT CGGGCAAGCA ATACGGCAAT CCTTTGGGCG ACGGTTCGGC GGTCATGCCG
CTGCAAACAA CCGTGCATGG CGTGTACCAC TTCAACTTTC ACTACTCGCT GCCTGAGCTG
GATTCACGCG GCGAAAAACG CGCTGGCCAC ACGGTCATTT TGGGCGCGAC TGGTGCCGGT
AAGACCACGC TGCAAACCAC GCTCTTGACC TTCCTGGGAA GGCTGGACAA CAAGCTGTTT
GCCGTGGACA AGGACGGCTC TATGCGCGGC TTCATCGAAG CCGTGGGCGG GACGTACTTC
CGGCTGGCCA GCGGCGAGCC TACGGGCTTG AATCCCTTCC AACTGCCCGA CACACCGCAG
AACCGCAACT TCCTCTATGA CCTGGTGGGC GCGTGTGGCC GCAAGGCTGG CCAAGAGGGC
ACGGCAGAGG ACACCAAGGA CATTAAACGG GCGGTGGACA ACGTGTTTGA GCTGCCGTTT
GAGCAACGGC GCTTCGGGGT GCTTCTGCAA AGCATCCCCG ACCGTGGCGA AAACTGCTTG
GCCCGCCGCC TGGCTGACTG GTGCTATGGC GAGGTGGACG GACGTTATGC CTACGCCCTG
GACAACCCGC AAAACAACTT CGATTGGGAA GGGTTCAAGC GCGTTGGCTT TGACGTGTCG
GATTTCTTGG TGGCTGGCCA CCCAGCCACT GAGCCAATTT TGGCTTACCT GTTCCACCTC
AAGACCTTGA TGCAGCGCGA CGGCGCGTTG CTGGCCACGG TCGTTGAAGA GTTCTGGTTG
CCGTTGCAAT ACCCCACCAC GGCAGACCAG ATTCTTGATT CCCTGAAAAC AGGCCGTCGC
CGGGGTGAAT TCATTGTGTT GGTGTCGCAG TCCCCCGAGG ACGTGATTAG AAGCCCGCTG
CTGCCTGCGG TGCTGCAACA GACACCGACC AAGATTTATT TGCCCAACCC TGACGCGGAA
TACACCACGC CAGACGGCGG TGGTTATTCG CGCTTCGGCT TGACCACCAA AGAGTTTCAA
AAGCTCAAGA AACTTGGGCT GCAAAGCCGC ATGTTTATGG TCAAGCAAGG TTCGCAATCC
AGCTTGGCCA AGCTGGATTT GAACGGCATG GGTGATGACA TTGCCGTGCT GGCAATGGAT
GCCGAAGACT TCAAGTATCT GGATGCTGCC AAGGCGCAAG CTGGCACGCA TCCTGACCAG
TGGGTGCCCC TCTACAAGGT GCTCCGCAAA AAAGGCCGCG AAAAAGTTTC TCAACCCGCA
ACCGTGAAGG AATGA
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| Protein sequence | MLSAILKKQF AGEEQLPPYN YHVRDTIVSL EDGRVAFILK AKSLPFEVTS DKVLENQYDG
LNGLLLSIAK STGSRLAVWA HLDHYQTEFK TDYRFGYEWM RLFSAKYMAK FEGTDIFEND
FYLTFILKPG MNDNLEECIR ELEEIQLSVT QTVAPYECEV LSMYEHDGNQ FSQFYEFIAY
LYNGFWERVP VTSLPLFQAV QTSALHHGYK LLETRFPDGG NRYSAFFDLK DFPDPTTRGK
FNPLLELPFP FIMCLSFTFI NTADSIRMIN QSLNKMESAG DEAVEQMDDM SLGKGAIMSG
QVYFGELHGA LAVYGKTEKQ TEDRGATART TLSGSCATQF VPATISAPET FFSMFPGNVK
RRPRPMPKTT RNLLGLFSMN TYSSGKQYGN PLGDGSAVMP LQTTVHGVYH FNFHYSLPEL
DSRGEKRAGH TVILGATGAG KTTLQTTLLT FLGRLDNKLF AVDKDGSMRG FIEAVGGTYF
RLASGEPTGL NPFQLPDTPQ NRNFLYDLVG ACGRKAGQEG TAEDTKDIKR AVDNVFELPF
EQRRFGVLLQ SIPDRGENCL ARRLADWCYG EVDGRYAYAL DNPQNNFDWE GFKRVGFDVS
DFLVAGHPAT EPILAYLFHL KTLMQRDGAL LATVVEEFWL PLQYPTTADQ ILDSLKTGRR
RGEFIVLVSQ SPEDVIRSPL LPAVLQQTPT KIYLPNPDAE YTTPDGGGYS RFGLTTKEFQ
KLKKLGLQSR MFMVKQGSQS SLAKLDLNGM GDDIAVLAMD AEDFKYLDAA KAQAGTHPDQ
WVPLYKVLRK KGREKVSQPA TVKE
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