| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_pVir0049 |
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| Symbol | |
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| ID | 4682064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008770 |
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| Strand | - |
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| Start bp | 31903 |
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| End bp | 33474 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 22% |
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| IMG OID | 639832952 |
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| Product | hypothetical protein |
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| Protein accession | YP_980108 |
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| Protein GI | 121582706 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000616443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAT CTTTTAGCGA TTATTGGGAA GAAATTCAAA AAATTAAAAA AGCAAGTTCA
GTTATAAAAG ATAATTATAA ACGCAATAAA GTTTTTAATA GTTTTGTTAA TAGTTATTCC
ATAAAACATA ATATTAATAA TATTAATCAA ACTACCTATT CTAAGCAAGC AGTGGTTAAG
CTTTGTTCTA ATTTATCTAA AGACGGAGCA AAAAGAGCAA TGGATTATAT TTTAAATAGT
GCTGATACTC CTTATCTTAT AAATGAAAAG GGGGAAGAGA TTTTAACAGA AGATGTGATA
AAAGATTGGA AAATGGATTT TTCAAATCAA GAAAATGCTA AAGACGCTTG GCATTTGATT
TTTTCTATTA AAGAAAATCC TACTGAAAAA AACTTAGAGA TTTTAAAAAA AAGTGTCAAA
GAAACTATGG ATAATAATTT TTTTGGTTAT AAGTATGTAA TGGCAATACA CACTCATCAA
AATAATCCGC ACATTCACAT TGTTTTAAAT AAAAGAAATA TTTTAACAAA AAAGAAAATT
CATTTTAATA CAAAAGATGA TATTAAAGAT TTTTGGAATG ATGTTAGAAG TAATTTTTCT
TTGTCTTTAA GTTCTAAAGG ATTACATTAT CATAACCAAG TTTCTTACGA AAAAGATTTA
GATAGAAAAT ATCAAAAAAT AAAAAGCACT TTATATCTTG ATGATATAGA TACAAAAAAA
GATTTAAGTG ATATGATTTT AAATATAATT AGAAAGGAAA GCAAAAAGCT AGAGAATAAA
AAATCTAAGA TTGATATTTT AAATAATGAA AGTTTAGAAT TAAAGCAAAA AAGACTAGAT
TTCATAAATC TTTTTAATCA ATACAAAAAG AAAAATAATA AAAAATACTT CAAATTAGGC
AAAGAGTTAA AAAAACTATC AGATGATTTA AATAAAATTG ATTTAAAAAT ATTATCAGAA
ACAAAAGAAA TTCAAAAAAT TAATGAAAAG ATTTCTCTTT TAAACAAAGA GCTTGATAAA
TATAATTATC AAAGCATTGT AGATACAAAA AATCTAAAGA ATTTCGTTGA TTTTATGCGT
AAAAATAAGC TAGCGACAAA AAGCGATTAT GATCTTTTAG AAAAAGTCAA ATTATCTATT
TTAAAAAATG ATGTTAATTT AGACAAAAGT TTAAAAAATA CTATGGAAGC TAATACTATC
CTAACAAAAC TCTTTAATGG CAAGAAAGAA AGCATTTTTA AAATAGAAAA AAAGATAAAT
AATATAAATA ATTATATAGA GATTTTAAAA CAATCAAACG CTGAAGTCAA AGAATATGAA
AATTATTTAA AAATCTTAGA AAAAAACAAA GAATTTTTAA AAGATTATGC TAAAAATCGT
TTAGATAATC TAAAACTTTC TATTTCTAAA AACAAGAATA AAATTCCTTT AAATGCTTAT
ATTATCCAAG AATATAAAAA AGGCTGTGAG TATTTAAATA TAAACGATGA TTTAAAATTA
GTTTCTGTGA AATCTAATAA AATTAATTAT GGTGGGTTTA ATAAGTCAAA AGATAATCAA
AAAATCTTAT AA
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| Protein sequence | MKKSFSDYWE EIQKIKKASS VIKDNYKRNK VFNSFVNSYS IKHNINNINQ TTYSKQAVVK
LCSNLSKDGA KRAMDYILNS ADTPYLINEK GEEILTEDVI KDWKMDFSNQ ENAKDAWHLI
FSIKENPTEK NLEILKKSVK ETMDNNFFGY KYVMAIHTHQ NNPHIHIVLN KRNILTKKKI
HFNTKDDIKD FWNDVRSNFS LSLSSKGLHY HNQVSYEKDL DRKYQKIKST LYLDDIDTKK
DLSDMILNII RKESKKLENK KSKIDILNNE SLELKQKRLD FINLFNQYKK KNNKKYFKLG
KELKKLSDDL NKIDLKILSE TKEIQKINEK ISLLNKELDK YNYQSIVDTK NLKNFVDFMR
KNKLATKSDY DLLEKVKLSI LKNDVNLDKS LKNTMEANTI LTKLFNGKKE SIFKIEKKIN
NINNYIEILK QSNAEVKEYE NYLKILEKNK EFLKDYAKNR LDNLKLSISK NKNKIPLNAY
IIQEYKKGCE YLNINDDLKL VSVKSNKINY GGFNKSKDNQ KIL
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