Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_pVir0003 |
Symbol | |
ID | 4682041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008770 |
Strand | + |
Start bp | 1745 |
End bp | 2881 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639832906 |
Product | VirB10 |
Protein accession | YP_980062 |
Protein GI | 121582660 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CATTTTTAAG CCTAAGTCTT GCAACAATAT TGTTAAGCAA CAATCTTTTT GCAGAAGATA TATTTGATCA AACAAGCGAA GAAAATGTAT CTAAAAATAT ATCTAAAAAA GACAATCAAA GCCAAAATTT GCTTAACAAA GAAGATTTAG ACTATCTTTT CAAAAATTCA GATACAAAAT TTCCAGTCAC CGATTATATT TATAAGGGCG GATTTAAAGA ACCTAACGAA GATATTAAAA TTCATAGTGA AGAAAAACCT AAAAAAGAAG AAGATAATAA TATTACTAAG TTAGCAAAAA TTGAAGAAAA AAAGCAAGAA CTGATACAAA AAAATCAGCA AATTGCAAAA GAAATTCATC AAGATAATAT TAGTTCTCAA GAAAGAAAAA TCAAAAAACT TATCAGAGAT AGTATTTTAG CTGATCGTGG CAACACGCAA ATTTATTTTC AAGAAAATTC TTCAAAATAC GGCGTTGATG GTTTTTCAAA CCAAAAAAGC ATAGATGTTT CAACAAACGA ACACCGTCTT TATAGAATGA TAAGAGCAGG AAGATTAATT CCTGCCCTTT TAACGAGTGC TATTTCTAGT GATTTGCAAG GTATAGTAAC CGCTCAAATA GAGCAAGATA TATATGCAAG TATGGGAAAT GCAGTGTTAA TTCCACGCGG AAGTAAGGCT ATAGGATTTT ACAAAAACGA CAACAAAATA GGACAAAATC GCTTAGAAAT ACAATGGAGA GAAATTATTA CACCACAAGG CGTTAATATA CTTTTAACCA ATGCTTTAGC TAGTGATAAT ATGGGTATGG CAGGAGCAGT TGGAAGCGTT AATAATAAAT ATCTTGAAAG ATACGGAATG CCTTACGCAC TCTCCACAAT TTCAAATGTA TTGCTTCTTA GCATAGCGTC AAAAGCAGGA AATAATAATT ACGCTCAAGA AGTTTATTCT CAAAGTAAAA ACGATGTATC TACGATAGTA GATGATATTA TCCAACAACA AAGCCAGATT AAACCAACAA TCGAAATTAA ATCAGGAAGT AGAATTTTTA TAGTTCCTAC CAATCATATG TGGTTTGCAA AACCTAAAAA CAACGAAGTA TTGATCCAAT ATTTCCAAGA TAATTAA
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Protein sequence | MKKSFLSLSL ATILLSNNLF AEDIFDQTSE ENVSKNISKK DNQSQNLLNK EDLDYLFKNS DTKFPVTDYI YKGGFKEPNE DIKIHSEEKP KKEEDNNITK LAKIEEKKQE LIQKNQQIAK EIHQDNISSQ ERKIKKLIRD SILADRGNTQ IYFQENSSKY GVDGFSNQKS IDVSTNEHRL YRMIRAGRLI PALLTSAISS DLQGIVTAQI EQDIYASMGN AVLIPRGSKA IGFYKNDNKI GQNRLEIQWR EIITPQGVNI LLTNALASDN MGMAGAVGSV NNKYLERYGM PYALSTISNV LLLSIASKAG NNNYAQEVYS QSKNDVSTIV DDIIQQQSQI KPTIEIKSGS RIFIVPTNHM WFAKPKNNEV LIQYFQDN
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