Gene Ajs_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4315 
Symbol 
ID4670438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008766 
Strand
Start bp56150 
End bp58408 
Gene Length2259 bp 
Protein Length752 aa 
Translation table11 
GC content66% 
IMG OID639826979 
Productconjugal transfer relaxase TraI 
Protein accessionYP_974141 
Protein GI121582612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.599721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA AGCACGTACC CATGCGCTCG CTGGGCAAGT CCGACTTCGC CGGCCTGGTG 
AACTACGTCA CCGACGCGCA GAGCAAGGAT CACCGGCTGG GCCAGGTGCA GATCACGAAC
TGCGATGCCA TGTCGGTACA GGACGCCATC ACGGAGGTTC TGGCGACCCA GCACACGAAC
ACGCGGGCCA AGGGCGACAA GACCTATCAC CTGATCGTCA GCTTCCGGGC TGGCGAGCAG
CCCAGCGCCG ACACCTTGCG GGCGATAGAG GAACGAATCT GCGCTGGGCT TGGCTTCGCC
GAGCATCAGC GCGTCAGTGC CGTTCATAAC GACACGGACA ACCTGCACAT CCATATCGCC
ATCAACAAGA TTCACCCCAC GCGACACACG ATGCACGAGC CGTTCGGCCA GCACCGGACG
CTGGCCGAAC TTTGCACGGC CCTGGAGCGC GACTACGGCC TGGAGCGCGA CAACCACGAA
CCACGCCAGC GCGGGGCCGA GGGCAGGGCG GCCGACATGG AGCGGCACGC CGGCGTGGAA
AGCCTGGTCG GCTGGATCAA GCGCGAATGC CTGGACGAGA TCAAGGGCGC GCAGTCCTGG
CAGGAGCTGC ACCAGGTCAT GCGCGACAAC GGCCTGGAGC TGCGCGAGCG TGCGAACGGC
CTTGTGATCG AGGCCGGCGA CGGAACGATG GTCAAGGCAA GCACCCTAGC CCGCGACCTT
TCCAAGCCGA AGCTGGAGGC GCGGCTTGGC CCGTTCGAGC CTTCGCCCGA ACGGCAGACA
CGAACCAAAG CGAAGCGGCA GTACCAGAAA GACCCGATCC GCTTGCGCGT GAACACCGTC
GAGCTGTACG CCCGGTACAA GGCCGAGCAG CAGACCTTGA CCGCGACACG TGGGCAGGCG
CTGGAGCAGG CCCGCCGCCG CAAGGATCGG CTGGTCGAGG CCGCGAAGCG TTCCAACCGC
CTGCGCCGCG CGACGATCAA GGTGGTCGGC GAAAGCCGCA CGAACAAGAA GCTGCTGTAC
GCCCAGGCCA GCAAGGCCCT GCGCGACGAA ATCCAGGCGA TCAACAAGCA GTACCAGCAA
GACCGCCAGG CCCTCTACGA CAGCCACAGC CGCCGCACGT GGGCCGACTG GCTCAAGAAG
GAAGCGACCC ACGGCAACGC CGAGGCGTTG GCTGCCCTGC GCGCCCGAGA GGCCGCGCAG
GGCTTGCAAG GCAACACCAT CCAGGGCCGG GGCGATGCAC GCCCCGGCCA CGCCCCGGTG
ACGGACAACA TCACCAAGAA GGGCACGATC ATCTTCCGCG CCGGCCTGTC GGCCGTCCGG
GACGATGGCG ACAAGCTGCA AGTCTCGCGC GAGGCCACGC GCGAGGGCCT GCAAGAAGCT
CTACGGCTGG CGATGGAACG CTACGGCAGC CGCATCACCG TCAACGGCAC CACGCAATTC
AAGGCGCAGG TCATCCGCGC GGCCGTTGAT TCCCAGCTAC CCATCACGTT CGCCGATCCG
GCCCTGGAGA GCCGGCGGCT TGCGCTATTG AAGAAGGAGA ACACCCATGA GCGACCCGAC
CGAACCGAGC GAGCCGACCA GCGACCCGCA GAACATCGAG GACGAGCTGG ACGCGGCCCT
GGCGGCCCTG GACAGCGAGC CGCTGCCCAC GACGACGCTG CCCGACCCGT CGCCATCGCC
CGAGCAGGCT TCGGGCGACC AGGTGCCGGG CGAACCGACG CCGCCGGCGT TCACGCCGGA
GCCGTCCACC GGAAGCCCGA CATTGGACGC ATTGGACGAG TCCCGCCGCC CCAAAGCCAG
CACCGTTTGC GAACGCTGTC CCAACTCGGT GTGGTTCGCA TCGCCGGCGG AAGTGAAGTG
CTATTGCCGC GTGATGTTCC TCGTCACCTG GAGCAGCAAG GAACCCAGCC AGATCACCAA
CTGCGACGGG GAATTTCTCG GCCAGGAACA GGGGTAGCAA CCGCGCCGCC GGGCCTTGCT
GCGGCGGATA AGTACATCGC GGAACGCGAG GCGAAACGCT CAAAAGGTTT CGATATACCG
AAGCACGCGC GATATACTGA CGGCGACGGT GCCCTTGCTT TCCAGGGCGT CCGCAACATC
GAGGGCCAGG CGCTGGCCCT GTTGAAACGA GGCGATGAGG TCATGGTGAT GCCCATTGAC
CAGGCCACGG CCCGGCGCTT GTCGCGCATC GCGGTCGGCG ATGCCGTGAC GATCACGCCG
AAAGGCTCCA TCAAAACGTC GAAAGGAAGG AGTAGATGA
 
Protein sequence
MIVKHVPMRS LGKSDFAGLV NYVTDAQSKD HRLGQVQITN CDAMSVQDAI TEVLATQHTN 
TRAKGDKTYH LIVSFRAGEQ PSADTLRAIE ERICAGLGFA EHQRVSAVHN DTDNLHIHIA
INKIHPTRHT MHEPFGQHRT LAELCTALER DYGLERDNHE PRQRGAEGRA ADMERHAGVE
SLVGWIKREC LDEIKGAQSW QELHQVMRDN GLELRERANG LVIEAGDGTM VKASTLARDL
SKPKLEARLG PFEPSPERQT RTKAKRQYQK DPIRLRVNTV ELYARYKAEQ QTLTATRGQA
LEQARRRKDR LVEAAKRSNR LRRATIKVVG ESRTNKKLLY AQASKALRDE IQAINKQYQQ
DRQALYDSHS RRTWADWLKK EATHGNAEAL AALRAREAAQ GLQGNTIQGR GDARPGHAPV
TDNITKKGTI IFRAGLSAVR DDGDKLQVSR EATREGLQEA LRLAMERYGS RITVNGTTQF
KAQVIRAAVD SQLPITFADP ALESRRLALL KKENTHERPD RTERADQRPA EHRGRAGRGP
GGPGQRAAAH DDAARPVAIA RAGFGRPGAG RTDAAGVHAG AVHRKPDIGR IGRVPPPQSQ
HRLRTLSQLG VVRIAGGSEV LLPRDVPRHL EQQGTQPDHQ LRRGISRPGT GVATAPPGLA
AADKYIAERE AKRSKGFDIP KHARYTDGDG ALAFQGVRNI EGQALALLKR GDEVMVMPID
QATARRLSRI AVGDAVTITP KGSIKTSKGR SR