Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4315 |
Symbol | |
ID | 4670438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008766 |
Strand | + |
Start bp | 56150 |
End bp | 58408 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639826979 |
Product | conjugal transfer relaxase TraI |
Protein accession | YP_974141 |
Protein GI | 121582612 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.599721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCA AGCACGTACC CATGCGCTCG CTGGGCAAGT CCGACTTCGC CGGCCTGGTG AACTACGTCA CCGACGCGCA GAGCAAGGAT CACCGGCTGG GCCAGGTGCA GATCACGAAC TGCGATGCCA TGTCGGTACA GGACGCCATC ACGGAGGTTC TGGCGACCCA GCACACGAAC ACGCGGGCCA AGGGCGACAA GACCTATCAC CTGATCGTCA GCTTCCGGGC TGGCGAGCAG CCCAGCGCCG ACACCTTGCG GGCGATAGAG GAACGAATCT GCGCTGGGCT TGGCTTCGCC GAGCATCAGC GCGTCAGTGC CGTTCATAAC GACACGGACA ACCTGCACAT CCATATCGCC ATCAACAAGA TTCACCCCAC GCGACACACG ATGCACGAGC CGTTCGGCCA GCACCGGACG CTGGCCGAAC TTTGCACGGC CCTGGAGCGC GACTACGGCC TGGAGCGCGA CAACCACGAA CCACGCCAGC GCGGGGCCGA GGGCAGGGCG GCCGACATGG AGCGGCACGC CGGCGTGGAA AGCCTGGTCG GCTGGATCAA GCGCGAATGC CTGGACGAGA TCAAGGGCGC GCAGTCCTGG CAGGAGCTGC ACCAGGTCAT GCGCGACAAC GGCCTGGAGC TGCGCGAGCG TGCGAACGGC CTTGTGATCG AGGCCGGCGA CGGAACGATG GTCAAGGCAA GCACCCTAGC CCGCGACCTT TCCAAGCCGA AGCTGGAGGC GCGGCTTGGC CCGTTCGAGC CTTCGCCCGA ACGGCAGACA CGAACCAAAG CGAAGCGGCA GTACCAGAAA GACCCGATCC GCTTGCGCGT GAACACCGTC GAGCTGTACG CCCGGTACAA GGCCGAGCAG CAGACCTTGA CCGCGACACG TGGGCAGGCG CTGGAGCAGG CCCGCCGCCG CAAGGATCGG CTGGTCGAGG CCGCGAAGCG TTCCAACCGC CTGCGCCGCG CGACGATCAA GGTGGTCGGC GAAAGCCGCA CGAACAAGAA GCTGCTGTAC GCCCAGGCCA GCAAGGCCCT GCGCGACGAA ATCCAGGCGA TCAACAAGCA GTACCAGCAA GACCGCCAGG CCCTCTACGA CAGCCACAGC CGCCGCACGT GGGCCGACTG GCTCAAGAAG GAAGCGACCC ACGGCAACGC CGAGGCGTTG GCTGCCCTGC GCGCCCGAGA GGCCGCGCAG GGCTTGCAAG GCAACACCAT CCAGGGCCGG GGCGATGCAC GCCCCGGCCA CGCCCCGGTG ACGGACAACA TCACCAAGAA GGGCACGATC ATCTTCCGCG CCGGCCTGTC GGCCGTCCGG GACGATGGCG ACAAGCTGCA AGTCTCGCGC GAGGCCACGC GCGAGGGCCT GCAAGAAGCT CTACGGCTGG CGATGGAACG CTACGGCAGC CGCATCACCG TCAACGGCAC CACGCAATTC AAGGCGCAGG TCATCCGCGC GGCCGTTGAT TCCCAGCTAC CCATCACGTT CGCCGATCCG GCCCTGGAGA GCCGGCGGCT TGCGCTATTG AAGAAGGAGA ACACCCATGA GCGACCCGAC CGAACCGAGC GAGCCGACCA GCGACCCGCA GAACATCGAG GACGAGCTGG ACGCGGCCCT GGCGGCCCTG GACAGCGAGC CGCTGCCCAC GACGACGCTG CCCGACCCGT CGCCATCGCC CGAGCAGGCT TCGGGCGACC AGGTGCCGGG CGAACCGACG CCGCCGGCGT TCACGCCGGA GCCGTCCACC GGAAGCCCGA CATTGGACGC ATTGGACGAG TCCCGCCGCC CCAAAGCCAG CACCGTTTGC GAACGCTGTC CCAACTCGGT GTGGTTCGCA TCGCCGGCGG AAGTGAAGTG CTATTGCCGC GTGATGTTCC TCGTCACCTG GAGCAGCAAG GAACCCAGCC AGATCACCAA CTGCGACGGG GAATTTCTCG GCCAGGAACA GGGGTAGCAA CCGCGCCGCC GGGCCTTGCT GCGGCGGATA AGTACATCGC GGAACGCGAG GCGAAACGCT CAAAAGGTTT CGATATACCG AAGCACGCGC GATATACTGA CGGCGACGGT GCCCTTGCTT TCCAGGGCGT CCGCAACATC GAGGGCCAGG CGCTGGCCCT GTTGAAACGA GGCGATGAGG TCATGGTGAT GCCCATTGAC CAGGCCACGG CCCGGCGCTT GTCGCGCATC GCGGTCGGCG ATGCCGTGAC GATCACGCCG AAAGGCTCCA TCAAAACGTC GAAAGGAAGG AGTAGATGA
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Protein sequence | MIVKHVPMRS LGKSDFAGLV NYVTDAQSKD HRLGQVQITN CDAMSVQDAI TEVLATQHTN TRAKGDKTYH LIVSFRAGEQ PSADTLRAIE ERICAGLGFA EHQRVSAVHN DTDNLHIHIA INKIHPTRHT MHEPFGQHRT LAELCTALER DYGLERDNHE PRQRGAEGRA ADMERHAGVE SLVGWIKREC LDEIKGAQSW QELHQVMRDN GLELRERANG LVIEAGDGTM VKASTLARDL SKPKLEARLG PFEPSPERQT RTKAKRQYQK DPIRLRVNTV ELYARYKAEQ QTLTATRGQA LEQARRRKDR LVEAAKRSNR LRRATIKVVG ESRTNKKLLY AQASKALRDE IQAINKQYQQ DRQALYDSHS RRTWADWLKK EATHGNAEAL AALRAREAAQ GLQGNTIQGR GDARPGHAPV TDNITKKGTI IFRAGLSAVR DDGDKLQVSR EATREGLQEA LRLAMERYGS RITVNGTTQF KAQVIRAAVD SQLPITFADP ALESRRLALL KKENTHERPD RTERADQRPA EHRGRAGRGP GGPGQRAAAH DDAARPVAIA RAGFGRPGAG RTDAAGVHAG AVHRKPDIGR IGRVPPPQSQ HRLRTLSQLG VVRIAGGSEV LLPRDVPRHL EQQGTQPDHQ LRRGISRPGT GVATAPPGLA AADKYIAERE AKRSKGFDIP KHARYTDGDG ALAFQGVRNI EGQALALLKR GDEVMVMPID QATARRLSRI AVGDAVTITP KGSIKTSKGR SR
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