| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4292 |
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| Symbol | |
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| ID | 4670432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | - |
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| Start bp | 41801 |
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| End bp | 42511 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639826958 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_974120 |
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| Protein GI | 121582591 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTT CACACAAGGT TGTCGTGGTT ACCGGCGCAT CGCAGGGTAT AGGCGCCGCG
GTCGTCAAGG CGTTTCGCAG GCTCGACTAT CGCATCGTTG CGACTTCGCG TTCGATCAAG
CCCTCGGAAG ATCCGGACAT CCTGACGCTC GCCGGTGATA TTGGCGATCC GGCAACCGCC
AAACGGGTCA TTTCCGAAGG TGTCGCGAAG TTCGGCCGGA TCGACACACT GGTGAACAAC
GCCGGCATTT ATATCGGCAA GCCTTTCACG GAACACACAG CGCAAGACTT TGCCGCGGTG
GTGAACGTGA ATGTGGCGGG CTTTTATTAC ATCACGCAGC TCGCCATCGC CGAAATGGAA
AAACATTCGA ACGGCCACGT GGTTAGCGTG ACCTCCAGCA CCGCTGACGC TGCGATCGGC
GGCGTGTATT CGGTACTGGC GGCCCTGACC AAGGGTGGTC TGAACGCCGC CACGAAGTCG
CTGGCGATTG AGTACGCCAG CAAAGGGATT CGCGTGAATG CCGTCGCACC GGGAATCATC
AGGACGCCGA TGCACGCGCC GGAAACTCAT GAAGCCCTGG GCGCCTTCCA TCCTCTCGGG
CGCATGGGCG AGATGAGCGA TATCGCCGAC GCGATTCTGT TCCTTGATTC CGCGCCGTTC
ATCACGGGAG AAATCCTGCA CGTCGATGGC GGCCAGAGCG CCGGTCACTA A
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| Protein sequence | MSISHKVVVV TGASQGIGAA VVKAFRRLDY RIVATSRSIK PSEDPDILTL AGDIGDPATA
KRVISEGVAK FGRIDTLVNN AGIYIGKPFT EHTAQDFAAV VNVNVAGFYY ITQLAIAEME
KHSNGHVVSV TSSTADAAIG GVYSVLAALT KGGLNAATKS LAIEYASKGI RVNAVAPGII
RTPMHAPETH EALGAFHPLG RMGEMSDIAD AILFLDSAPF ITGEILHVDG GQSAGH
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