| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4290 |
|---|
| Symbol | |
|---|
| ID | 4670433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008766 |
|---|
| Strand | + |
|---|
| Start bp | 39194 |
|---|
| End bp | 40810 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639826957 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_974119 |
|---|
| Protein GI | 121582590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTGTA TTTACACAGT ATTTATGCCA GCCACCTCCA AGCCCAAGCT CTACAACCCG
CGCCACCCCG AGCGCACGCT GCTCTACCAA ACGGTGGCCG AGCATTACGA GACCTGGCTT
GATCTGGCCA GCGCCGGCCA GTTCGACGGC CAGGGCGACC ACCGCAGCCC CAAGCCCTAT
GTGCGCCAAG CGTTTGCCAA GTACCTGGAA TGCGGCATCT TTGCCCACGG CTTTGCCCGT
GCCCGCTGCG ACGACTGCGG ACACGACTTT CTGGTGGCCT TTTCCTGCAA AGGCCGGGGC
GTCTGCCCCT CGTGCACCAC GCGGCGCATG GCCGAGACAG CGGCACACCT CACCGACCAC
GTCTTCCCCC GCCTGCCAGT GCGCCAGTGG GTGCTGTCGG TTCCCAAGCG GCTGCGCTAC
TTTATGCAAC GCGACAGCGT GGTGCTGGGC ATGGTGTTGC GCATCTTCTT GCGCGTCATT
GAGCAAACCC TGCAAGCCAA CAGCCCATGC GCAGCGCATG CGAACAAGGC CGCCCTGCAC
ATCGGTGCAG TCGCCTTCAT TCACCGCTTT GGCTCCAGCC TGAACGAGCA TGTGCATTTC
CATGTGTGCG TGGTCGATGG CATGTTTGAG GCGGTGGCAG GGGAGGCGAG TGAGCAGGGC
ACCCGCACCA CAGCGATCAG CGTCATGTTT CACCCGGCTA TCGGCATCGA CCCCGAAGCG
GTGACCCAAG CCCAGGCCAG TTTGCGTCGG CGCATCCTGC GCGCCTTTGT GGGCCGGGGC
CTGCTCGAAG GCTTCGAGGC CCAGGAGATG CTGGGGTACA AACACAGTGG GTTTTCGGTA
GACACCAGCG TGTGCATAGC AGCACAAGAC CGAGCGGGCC TGGAGCGCCT GCTGCGCTAC
TGCGCACGGC CCCCGTTTGC GCTGGATAGG CTGCGCAAAG CGGGCAGTGA GCTCATTTAC
CGCTGCGCCA AGCAGCACAG CGAGCCTGGC AGTGACCGGC GCGACCAACG CAAGGCAAAG
CGAGGTGTTC GGGCCGACGA ACTGCACCTC ACGCCGCTCG AACTCATCGA CCGCCTTGCC
GCGCTGGTGC CGCCACCGCG TGCGCACCGC CACCGGTACT ACGGCGTGCT GGCGCCCAAT
TCACCCCTGC GGGCTGCGGC GGTTGCACTG GGCGCAGGCC AAACCGCAGG CGCGGGCACG
GGCACGGCAC AGCCCGAGCC AGGCGGTGTG ACCGCAGCGG TGGATGCCAT GGGAGTGGCC
ACGGTCGGTG GTCCCAGCCA GCCCGAGCCC ACCCAGCCAG CTCTGCCCAA ACGCTCAGCT
CACATTCTGT GGGCGGTGCT GATCGCCCGC ATCTACGAGG TGTTGCCGCT GTTGTGCCCG
CTCTGCGGTG GCCAGATGCG CATCATCGCT TTCATCACCT ACAGTGCCGA CCTCCGGCAC
ATCCTGGAGC ACATCGGGGT GGAGACAGAG CCGCCTCGCA TCGCGCCAGC ACGCGGGCCG
CCGCTGTGGG ATGGGTGCGA TGTGCCGATG GGCGATGGTG TCGAGGTTGA GCCAGATTGG
GGCGAGGCGG CCCAACCGGC GCCGGACTTT GAGGTCGATC AGCGCGTCAG TTGGTAA
|
|---|
| Protein sequence | MLCIYTVFMP ATSKPKLYNP RHPERTLLYQ TVAEHYETWL DLASAGQFDG QGDHRSPKPY
VRQAFAKYLE CGIFAHGFAR ARCDDCGHDF LVAFSCKGRG VCPSCTTRRM AETAAHLTDH
VFPRLPVRQW VLSVPKRLRY FMQRDSVVLG MVLRIFLRVI EQTLQANSPC AAHANKAALH
IGAVAFIHRF GSSLNEHVHF HVCVVDGMFE AVAGEASEQG TRTTAISVMF HPAIGIDPEA
VTQAQASLRR RILRAFVGRG LLEGFEAQEM LGYKHSGFSV DTSVCIAAQD RAGLERLLRY
CARPPFALDR LRKAGSELIY RCAKQHSEPG SDRRDQRKAK RGVRADELHL TPLELIDRLA
ALVPPPRAHR HRYYGVLAPN SPLRAAAVAL GAGQTAGAGT GTAQPEPGGV TAAVDAMGVA
TVGGPSQPEP TQPALPKRSA HILWAVLIAR IYEVLPLLCP LCGGQMRIIA FITYSADLRH
ILEHIGVETE PPRIAPARGP PLWDGCDVPM GDGVEVEPDW GEAAQPAPDF EVDQRVSW
|
|---|
| |