| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4277 |
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| Symbol | |
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| ID | 4670485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | + |
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| Start bp | 24992 |
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| End bp | 26215 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639826949 |
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| Product | TrfA family protein |
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| Protein accession | YP_974111 |
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| Protein GI | 121582582 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000000371968 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.868321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACA GTTTCGACGA GCAGGGCTAT CGCCGCAAGC TCATCGAAGG CGGGTTGAGT
GAGGCCGACG CGACGGCGCT TGCCCGCCGC TACGCGGCCG AGCGCACCAC GCAGGCCGGC
ACCGCTGGCG GGGCTTTCCG CCCCGCCGGT TCCCTCTTCG AGCTGCCGGA CGGGCCGGCA
GCGCCGGAGC CGCCGCCACC GCCGCCCAGC GCGGCCGTGG CGCGCTCCGA ACAGATGGCG
GCCGAGTCGG CCGAACTGGC GCGGACTATG GGCCTTCCGC CCGAGCCGCG CACCGTGGTC
AATGCCCTGG CCGAGAAAGT CAGCGGCGTG ACCGCCGAAC GGAGAACGCA GCAGATGGCG
ACCAAGAAAA CGACCGAGAA GCCGGCCGGT GCCACCGGCG AGCTGGCCGC CCAGGTCAGC
CAGGCCAAGC AGGCCGCCTT GCTCAAGCAC ACGAAGCAGC AGATCAAGGA CATGCAGCTT
TCCTTGTTCG ACCTCGCGCC GTGGCCCGAC CACATGCGCG CGATGCCCAA CGACTTCGGC
CGGTCGGCGA TCTTCACGAC CAGGAACAAG AAGGTGCCCC GCGCCGCCTT GCAGCGCGAG
CCGATCTACC ACATCAGCAA GGACGTGGAG ATCACCTTTA CCGGCGTCGA GCTGCGCGCC
GACAGCGACG AGCTGGTGTT TGCCCAGGTG CTCGAATACG CGAAGCGCAC GCCGCTGGGC
GAGCCGGTCA CGTTCACGTT CTACGAGATT TGCCAGGACT TGGACTGGTC GATCAATGGC
CGCTACTACA AGCAGGCCGA GGACTGCCTT TCGCGGCTGC AAGCGTCCGC GATGCAGTTC
TCGTCCCAGC GGCTGGGCCG CCTGGAATCC GTGTCCCTGA TCCGGCGCTT CCGCATCCTG
GATCGCGGCA AGCGCACGTC GCGCTGCCAG GTCGAGATCG ACACTGAAAT GGTGGTGCTC
TTCGCCGGCG ACCACTACAC GAAATTCGTG TGGGAGAAGT ACCGCAAGCT GTCGCCCACC
GCCCGGCGGA TGTTCGACTA CTTTGCCACC CACCGGGAGC CGTACCCGCT CAAGCTGGAG
ACGTTCCGGC TCATGTGCGG CTCTGATTCC ACCCGGCCGA AGAAGTGGCG CGAACAGGTC
AGCGAGGCGT GCGACGAGCT GCGCAGAAAC GGTCTGGTGG ACAGCGCCTG GATCAACGAT
GACCTGGTGC ATTGCAAGCG ATGA
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| Protein sequence | MPDSFDEQGY RRKLIEGGLS EADATALARR YAAERTTQAG TAGGAFRPAG SLFELPDGPA
APEPPPPPPS AAVARSEQMA AESAELARTM GLPPEPRTVV NALAEKVSGV TAERRTQQMA
TKKTTEKPAG ATGELAAQVS QAKQAALLKH TKQQIKDMQL SLFDLAPWPD HMRAMPNDFG
RSAIFTTRNK KVPRAALQRE PIYHISKDVE ITFTGVELRA DSDELVFAQV LEYAKRTPLG
EPVTFTFYEI CQDLDWSING RYYKQAEDCL SRLQASAMQF SSQRLGRLES VSLIRRFRIL
DRGKRTSRCQ VEIDTEMVVL FAGDHYTKFV WEKYRKLSPT ARRMFDYFAT HREPYPLKLE
TFRLMCGSDS TRPKKWREQV SEACDELRRN GLVDSAWIND DLVHCKR
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