| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4273 |
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| Symbol | |
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| ID | 4670501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | - |
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| Start bp | 22382 |
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| End bp | 22846 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639826945 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_974107 |
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| Protein GI | 121582578 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000000000103754 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCT CTCTGTCGGC GTTCCGCTTC AACCGCAGCG CCATGTTCTA CCTGGGCCTG
TTCGCCCTCC TGGCGTTCAT GATGCTGGCC CCGCACCCCG CCTTCGCCTC CGAAGGCACC
GGCGGTTCGC TGCCTTATGA AAGCTGGCTG ACCAACCTCC GCAACTCCGT CACCGGCCCG
GTGGCCTTCG CGCTGTCGAT CATCGGCATC GTGGTCGCCG GCGGCATCCT GATCTTCGGC
GGTGAACTCA ACGGCTTCTT CCGCACGTTG ATCTTCATCG TCCTGGTCAT GGCCCTGCTG
GTCGGTGCGC AGAACATGAT GAGCACGTTC TTCGGCCGTG GCGCGGAAAT CGCCGCCCTG
ACCGATGGCG CGCTGCACCA GGTCAAGGTT GCCGCGCTGG ACGTGGCCGG CTTCCCCGGT
GAGGCCGTCA TGCGCTGGGC CGAACGCGGC CACATCGCGG GGTAA
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| Protein sequence | MQASLSAFRF NRSAMFYLGL FALLAFMMLA PHPAFASEGT GGSLPYESWL TNLRNSVTGP
VAFALSIIGI VVAGGILIFG GELNGFFRTL IFIVLVMALL VGAQNMMSTF FGRGAEIAAL
TDGALHQVKV AALDVAGFPG EAVMRWAERG HIAG
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