Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4268 |
Symbol | |
ID | 4670469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008766 |
Strand | - |
Start bp | 17325 |
End bp | 17813 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639826940 |
Product | conjugal transfer protein TrbH |
Protein accession | YP_974102 |
Protein GI | 121582573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.121347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00518099 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCAAGA TCGTCTCTCT CGCGCTGCTC GCCCTCGCCC TGGGCCTCGG CGGCTGCGCC ACCACCGGCC AGTACGGCAA CTTCGTCCAG TCGGCCGCGC TCGATCAGCA GAAGCTCGCC GCCGACGCGG TGCAGCAGCT CGCCACGCTG TACGCGCCGG CGCGCACGCG CCTGGAGCTG CAACAGCCGA CGCCCGACCC GTTCGGCCAG GCCCTGGTCA AGTCGCTGCG CGACAAGGGC TATGCCCTCC TGGAGTTCGC CCCGGCCGGC GCTTCCGCGC AGGCCCCGGC CTCGGCCGCA TCGCAGCCGA GCGCACCGGC CACCACGGCC GCGCCGGGCG GCCTGCCGCT GCGCTATGTG CTCGACCAGG CCGGCGACTC GAACCTGTAC CGCCTGACCT TGATGGTCGG CAACCAATCC ATCACCCGCC CGTACCTGGC GCAAAACGGC ACGTTCGCGC CGGCCGGGTA CTGGGTGCGC AAGGAGTGA
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Protein sequence | MRKIVSLALL ALALGLGGCA TTGQYGNFVQ SAALDQQKLA ADAVQQLATL YAPARTRLEL QQPTPDPFGQ ALVKSLRDKG YALLEFAPAG ASAQAPASAA SQPSAPATTA APGGLPLRYV LDQAGDSNLY RLTLMVGNQS ITRPYLAQNG TFAPAGYWVR KE
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