Gene Ajs_4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4259 
Symbol 
ID4670493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008766 
Strand
Start bp10449 
End bp10880 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content68% 
IMG OID639826931 
Producthypothetical protein 
Protein accessionYP_974093 
Protein GI121582564 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00984605 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAAAAC CCGTTCTTCT GGCCCTCTCC CTGGCGTTCC TGGTCAGCGC GCAAAGCGCA 
CTGGCCGCCG GCGACGCCGG CAACTTCGGC ACGCCGATCA AGTCGGGCGT GTCGGTGTCC
TTCCCCGACA GCAGCGCGAC GTTCCAGCCG ACGCCCGAGG CCCTGGAGCT GCTGGCCGAC
GCCAGGAATG CGGCAATCAT CTACATCAGC GGGCGCACCA GCACGCTACG GCCTAGCGCG
GCCGACGAGG CCCTTGCACT GCGCCGTGCC CTGTCGGCCA GGTCGTACCT GGTGGCGCGC
GGCGTCTCGC CGCTCAAGAT CATGGTGAAC TTCGCATCGG CCGCCGACTT CGTGGCCGAC
AACTCGACGG CCGAGGGCCG GCGCGAGAAC CAGCGCGTGG ACATTGAGGT GGTCTACATC
CCCACCTACT GA
 
Protein sequence
MRKPVLLALS LAFLVSAQSA LAAGDAGNFG TPIKSGVSVS FPDSSATFQP TPEALELLAD 
ARNAAIIYIS GRTSTLRPSA ADEALALRRA LSARSYLVAR GVSPLKIMVN FASAADFVAD
NSTAEGRREN QRVDIEVVYI PTY