Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4248 |
Symbol | |
ID | 4670502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008766 |
Strand | + |
Start bp | 4 |
End bp | 4746 |
Gene Length | 4743 bp |
Protein Length | 1580 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639826921 |
Product | hypothetical protein |
Protein accession | YP_974083 |
Protein GI | 121582554 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4227] Antirestriction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00909879 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.515927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATCA TCCAGGCCGA GGCGCAGGCC GCCACCCTGG CGTTCACCCG AGACTATCCG GGCGCGTTGG AGCTGATCTA CCACTTCCGC GAGAGCACCG GCGAGCTGTA CGGCCACCGC GCAGCGGAAG TTCCGGCAGA CCTCAAGGGC GGCTATCTGT CGAAGGAGCA AATCCACAAC GGCCGTTCGT ACCGTGGCCG CGTGGACGTG CCCCTTGGGA ACATGGACGA CGCCGCCGAC CTGCTGGTGA CATTGCGGCA TGAAGTGCTG GGCCACTACG GGGCCAACAC CTTCGCGCCG GCCGAGAAGC GCGCCCTGCT GGACGGCATC ATCGCCGCCC GCGAACAGCC CGGCATGAAA GACCGCTGGG AGGACATCAA CCGCCGCTAT GCCGGCACGT CGATGGACGT GCGGGCCGAA GAGGTATGGG CGCTGCATTG CGAAACCCTC GCGCCCGGCC AGCACGTGGG CCAGGCCCAC GTGCGCGAGC GCGGCGAGCA GTCATTCATG GAAACCTGCA TCGCCCGCGT GAGGCCCATG CAATCCGCCG ACCTGCACAA CATCGTGTGC ATGGTCGCCG ATGGCCTTCA CGACCGTTCC AGGACGCAGC AGACCTTTCC GCAGATCAAC GAACTATTCC GAAGGGATGA AACTATGGAA CCGAAGAAGC CATTTCATGA AGTCGTTGCC GAAAAACTGA TCGAGCAGCT CAAGGCCGGC ACCGCACCGT GGCAACGACC GTGGGAGCCT GGCGAGCCGA ACGCCTACTT GCCGATGAAC CCGACCACCG GCAAGCGGTA CAAGGGCATC AACGCCATTC ACTTGATGGC CCAGGGCCGC AGTGATGGCC GTTGGATGAC CTACAAGCAG GCCGCCGCCG TGGGCGCGCA GGTACGCAAG GGCGAGAAGG GCACGCCCGT TCAATACTGG AAATTCAGCG AGGAACAGAA CAAGGTCGAT GAGAGCGGCC GGCCCGTTCT CAACGCGAAG GGCGAGCCGG TCAAGGAAAC CGTGCAGCTC GAACGCCCGC GCGTGTTCTT CGCCACGGTG TTCAACGCCG AGCAGATCGA CGGCCTGCCG CCGATCCAGA AGAAGGAACA GACCTGGAGC GCCGTCGAGC GCGCCGAGCA CATCCTGAAA GCGTCCGGCG CGTCGATCAC GCACGCGCCT GGTGATCGCG CCTTCTACCG GCCGGCGACC GACAGCATCC ACCTTCCCGA CCGGGGCCAG TTCCCCAGCG CCGACAACTA CTACGCGACG GCCCTGCACG AGCTGGGCCA CTGGACGGGC CACGCCTCGC GGCTTGACCG CGACCTGGCG CACCCGTTCG GGAGCGAGGG TTACGCCAAG GAAGAGCTGC GGGCCGAGAT CGCTTCGATG ATCTTGGGCG ACGAGCTGGG CATCGGCCAC GATCCGGGCC AACACGCCGC CTATGTCGGT TCTTGGATCA AGGCGCTGCA AGACGAACCG CTGGAAGTGT TCCGCGCCGC CGCCGACGCC GAGAAGATTC ACGATTACGT GCTCGCCTTC GAGCAAAAGC AGGTTCAGGA GCAAGACCAG CAGCAGAGCC AGGCACAGCA GCAGCCGCAC GAATTGACCC TGGCGCAGTT TGCCAGCCAG GCGACCGCGC AGGAATTGAT GAACCACGGC CGGAAGTGGG AAGTGAGGCA CGGCGACTAT TCGGCCTTCT CCGATGCCGC CACGGCCGAG GAAGCCATCG CGGACGTGCA TCGCGGCGCG GTGAATAACG CCCTATACCT CAACACGCCC GAGAGCCGCA GCGCGAACCT GCCGGGCAGC AGCTTCCCGC CGGCGGCGGT GTTGGCCGAA TACCCCGACC TGGTGGAGAA GTTCCCCGAC GCGGTGCCCG CGCCCGAGCT GGGCCATCAG CCGGGCGACC AGGTGCAGAC CGTGGCCGAG CGCACGGCAA GCCAGTACGA GGCTATGAAG GCCGCCGACG AGGCTTTCCA GCGTGAGCTT GTCCGGGCCT ATGGCGAGGA CAACGCCGGG GACGCCCGCT ACAAGCCTCG CCACGACGAT GAAGCCGTGC AGAAGGCCGG CGATGCCTTC GTGGCCGCGT CCGACACTTG GCGCGAAGCC GTGCGGGAGG CCCGCGAAAC CGTTGCAAGT CAGGAGGCCA GCATGCAGAC ACCGGAAGCG CAGAACGAAG CCGTGGCGAC CGCCCTGGAG GCGGCCGGCT GGCAGCGTGG CGATGGCATC GCCATCGCGT CCAAGCCCTT CGACACGGTG AACGGCCGCA ATGACGCGCT GGCCTTCATC ACCGACGGCG ACGGGATCAA CCGCACCTTG CAGTTCCAGT ACACCAGCGA GGGCCGCAAC GTCACCGGCG CGGACGGCGT GCTGATCCCG GTCGGCGCGA CGGCGGCCCA GGCGGCCGAG CTGGCGACGA GCGCCGCCGC CAGGGCCGAG AAGTCGATTC AGGATTCCTA TGGCGTCAGG ATCGCGGCCA TGCAGCAGGC GGGCAAGCAA CAGCAGGACG CCGAGGCGTG GGCCTTGAAG CACGTCGAGC AAGGCACCAT CGGGCGCTTG CTCGAAAGCG CGAGCCTGGA GCAGATCGAC CGCGCCCTGG ACGTGCTGGA CAGCATGCAG CCCATGAACA CCCAAAACGA GTTCTGGACG CGCCACGAAC TGCCCTTCGA CCCCGAACCG CTGCAAGACA AGATCAACGC GGCGATGAAT GACCTCATCG AGAACCGGCG GCCCGATGCC GTGGTGGCTG CGACCTTCCT TGACCTCAAG ACCGGCAACA CCAATTCACG CGAGCGCGAC CGCCAGGCAT TCGACACGGC GGCCGACAAC GCGCTGGGCT TCACCCTGCC CCATGACTGG ACGGGTGAAG TGCGGGTTGT CGGCGTGATC GAGCGCGACG GCGAATTGCA ATCCGCCGCC GTGGGCGACA CGCCCGAGGC TTACCACCTG TACGCCCGCA AGGGCGATGC GCAGCCCGGC GAAGATGCGT TTGCCTACCT CACCGCGACC CGCACGCTCG GCGAGGCCGA CGAGCTGGCC GACCGCCTGG CGCTGATCGA CGCCAACGCC CAAACCGACC AGTACGAGAA AGCCACCCGC GTTGCCCGCG TGCAAGAGGA TCGCGTTCGC CGCGATCCGA ACAGCACCGA CGAGGACATT TCAGCCGCTA AAGAGGCGCG CAAGGCGCTG GAGGCCAGGG CATTCGTTGC GGCCGAGCAA GCCAAGACCA GCCAGCGCGA TGCCGAGCAG CCCAAGGCCG CGCAGAGGGC CGCAAGTGGC GAACGCCAGT TCATCAACGT GCCGTTCAAG GAGAAGGACG AGGCCAAGCA GCTCGGAGCG CGCTGGGATC GCAAGGAACA GTCCTGGTAC GTGCCGGCGG GAGTGGATGC GGCCCCCTTC GCCAAGTGGG CACAGGGAGC CGCTACGGCG GCCGTGGAGC CTCGCAAGGC CCAAGAGGCT CCGCAAGCCC ATGCCGGCGG CCAGAAGGCC GCCACGGCCC CGCAGGAGGC CCGCCAGTAC CTCGCCGTGC CATACGAACA GCGCAACGCC GCCAAGGCCG CCGGTGCGCT TTGGGACAAG GCCGCGAAGT CCTGGTATGC CGGCCCGCGT GCCGACATGG CGAAGCTGGA GCGGTGGAAG CCCGAGAACG TGCAGGCCCA GCAGGGGCCA GCGATGACGC CAAGGGAAGA GTTCGCCGAG GCCATGCGCA GCGCCGGCCT GTTCACCGGC AGCAACGCCC AGGGCGATCA CCCGATCATG GACGGCAAGC GGCATCGCGT GCCGGTCGAG GGTGGCAAGA AGGGCGCGCT CGATGGCTTC TATGTCGGCC ACCTGGACGG CCACCCGGCC GGCCGGATCA TCAACAACAA GACCGGCACG GACATTACCT GGAAGAGCAA GGGTTACGCC TTGAGCGACC AGGAGAAGGC CAAGCTCCAG GCCGAGGCGG CCGAGAAGCT GGCCCAGCGT GCGGCCGAGC AAGACAAGCT CCAGGAAGCC ACCGCGCAGC GCGTAGGCCG CCAGATGGCC GACCTGGTGC CGGTCGAGCA GCCGACGCCC TACCTGCAAG CCAAGGGCAT CGAGGCCCAC GCCGGCGTGT TCACCGACCG CGAGGGCCAG AAAACCTACA TCCCCGCCTT CGACGCGGAC GGCAAGCAGT GGACGATGCA GTACATCCAG GAGGACGGCA CCAAACGGTT CGCCAAGGAC AGCAAGAAGG AAGGATGCTT CCACCCGGTT GGCGGCATGG ATGCGCTGGC CGCAGCGCCG GCGCTGGTGA TCTCCGAGGG CTACGCCACG GCGGCGAGCC TGGCCGAAGG GCTGGGGCAT GCCACCGTGG CCGCGTTCGA CTCGGGCAAC CTGCCGCACG TGGCCCGCGC CCTGCGCGAG AAGTTCCCCG ACAAGCCCAT CGTGATCGCC GGCGACGACG ACAAGGCCCA GGAGATCGAG CGCGGCCACA ACCCCGGCCG CGCCAAGGCC GAGGAAGCCG CGAAGGCCGT AGGCGGCAAG GCCATCTTCC CGATCTTCGC GCCGGGCGAG CAGCAGGCGA ACCCCAAGGG CTTCACCGAC TTCAACGACC TGGCGAACAA GAGCGAGCTG GGCCGCGATG GCCTCAAGCG CCAGGTCGGC GCGGCCGTGG GCCAGGTGCT GATCGAGGAA GGCCGCCGGC AACAGCAGGA GCAGCGCCAG GAGCGTGCGG AGAAGCAACA GCAGCAGCCG GAACGCCCTC GCCGCGCTGC ACGCATCGGC TAA
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Protein sequence | MPIIQAEAQA ATLAFTRDYP GALELIYHFR ESTGELYGHR AAEVPADLKG GYLSKEQIHN GRSYRGRVDV PLGNMDDAAD LLVTLRHEVL GHYGANTFAP AEKRALLDGI IAAREQPGMK DRWEDINRRY AGTSMDVRAE EVWALHCETL APGQHVGQAH VRERGEQSFM ETCIARVRPM QSADLHNIVC MVADGLHDRS RTQQTFPQIN ELFRRDETME PKKPFHEVVA EKLIEQLKAG TAPWQRPWEP GEPNAYLPMN PTTGKRYKGI NAIHLMAQGR SDGRWMTYKQ AAAVGAQVRK GEKGTPVQYW KFSEEQNKVD ESGRPVLNAK GEPVKETVQL ERPRVFFATV FNAEQIDGLP PIQKKEQTWS AVERAEHILK ASGASITHAP GDRAFYRPAT DSIHLPDRGQ FPSADNYYAT ALHELGHWTG HASRLDRDLA HPFGSEGYAK EELRAEIASM ILGDELGIGH DPGQHAAYVG SWIKALQDEP LEVFRAAADA EKIHDYVLAF EQKQVQEQDQ QQSQAQQQPH ELTLAQFASQ ATAQELMNHG RKWEVRHGDY SAFSDAATAE EAIADVHRGA VNNALYLNTP ESRSANLPGS SFPPAAVLAE YPDLVEKFPD AVPAPELGHQ PGDQVQTVAE RTASQYEAMK AADEAFQREL VRAYGEDNAG DARYKPRHDD EAVQKAGDAF VAASDTWREA VREARETVAS QEASMQTPEA QNEAVATALE AAGWQRGDGI AIASKPFDTV NGRNDALAFI TDGDGINRTL QFQYTSEGRN VTGADGVLIP VGATAAQAAE LATSAAARAE KSIQDSYGVR IAAMQQAGKQ QQDAEAWALK HVEQGTIGRL LESASLEQID RALDVLDSMQ PMNTQNEFWT RHELPFDPEP LQDKINAAMN DLIENRRPDA VVAATFLDLK TGNTNSRERD RQAFDTAADN ALGFTLPHDW TGEVRVVGVI ERDGELQSAA VGDTPEAYHL YARKGDAQPG EDAFAYLTAT RTLGEADELA DRLALIDANA QTDQYEKATR VARVQEDRVR RDPNSTDEDI SAAKEARKAL EARAFVAAEQ AKTSQRDAEQ PKAAQRAASG ERQFINVPFK EKDEAKQLGA RWDRKEQSWY VPAGVDAAPF AKWAQGAATA AVEPRKAQEA PQAHAGGQKA ATAPQEARQY LAVPYEQRNA AKAAGALWDK AAKSWYAGPR ADMAKLERWK PENVQAQQGP AMTPREEFAE AMRSAGLFTG SNAQGDHPIM DGKRHRVPVE GGKKGALDGF YVGHLDGHPA GRIINNKTGT DITWKSKGYA LSDQEKAKLQ AEAAEKLAQR AAEQDKLQEA TAQRVGRQMA DLVPVEQPTP YLQAKGIEAH AGVFTDREGQ KTYIPAFDAD GKQWTMQYIQ EDGTKRFAKD SKKEGCFHPV GGMDALAAAP ALVISEGYAT AASLAEGLGH ATVAAFDSGN LPHVARALRE KFPDKPIVIA GDDDKAQEIE RGHNPGRAKA EEAAKAVGGK AIFPIFAPGE QQANPKGFTD FNDLANKSEL GRDGLKRQVG AAVGQVLIEE GRRQQQEQRQ ERAEKQQQQP ERPRRAARIG
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