| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4188 |
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| Symbol | |
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| ID | 4670387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008765 |
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| Strand | + |
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| Start bp | 22495 |
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| End bp | 23154 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639826862 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_974024 |
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| Protein GI | 121582492 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.141234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000181264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGGAATAA AAGTATTTCT TGCGGACGAT CACCGGCTGC TGGTAGCCGG TTTCCGCGAT
GTATTGAAGG ACTACGGGAT CGACGTAGTA GAGGTGGCCT ACAGCCTGGA TGGGCTGATC
GACCGCTTCT TAGAGGTCAA GCCGGATGTC CTGGTGATCG ACGTGCGCTT TGACAGCAAA
GGCTGTGGTG AGAACGGGCT GGACGTGTGC GAGGAACTAC TGGCCCGCGA CCCCTCGGCC
AAAATCATTG TCTTTAGCCA GTTTGACGAC CAATACATCA TCGAGCGTTC CTACAAGCTC
GGCGTGCTGG CCTTTGTGCG CAAGGATGAA AGTACGGAAG TGCTCAACGA GGCTATCAAC
ACGGTAGCCC AGGGCAAGGA ATACTTTTCC CCCGAGATTG CCCGCCTACT CGCATGGTCG
GCCGTCAAGG ATCGGAACCC GAACCGGCTC CTGGATGAGA ACGAAATGCG GGCCTTCAGC
CTTGCAGCCG ATGGCGCATC CATGACCGAA ATTGCCACCG CGATGGACTT GTCCACCAAG
ACCATTGGCC ACTTGATGAA GGGCGTAAAA GCCAAGCTAG GCGTTGAAAG CCAAGCTGAC
ATCACCAAGC TGGCGATCCG TCACGGCATT ACGACAACTG CCCTGAAAAC GAAAAGCTGA
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| Protein sequence | MGIKVFLADD HRLLVAGFRD VLKDYGIDVV EVAYSLDGLI DRFLEVKPDV LVIDVRFDSK
GCGENGLDVC EELLARDPSA KIIVFSQFDD QYIIERSYKL GVLAFVRKDE STEVLNEAIN
TVAQGKEYFS PEIARLLAWS AVKDRNPNRL LDENEMRAFS LAADGASMTE IATAMDLSTK
TIGHLMKGVK AKLGVESQAD ITKLAIRHGI TTTALKTKS
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