| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4182 |
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| Symbol | |
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| ID | 4670389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008765 |
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| Strand | - |
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| Start bp | 19147 |
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| End bp | 19884 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639826856 |
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| Product | hypothetical protein |
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| Protein accession | YP_974018 |
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| Protein GI | 121582486 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02756] type-F conjugative transfer system secretin TraK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000230688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000485707 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTCCAA GATCGAAGAA ATCGTTAAGC GCGATCCTTC TGCTAACAAG CCTGCTGGCA
ACTGAAGCAG GCGCAACGCA AGTCGTTGAG AACGCTGACC GGGGCCACGT TCAAGTCAAT
ATCTCGGTCA ACGAAACCAA CCGTCTCGCA ATCGACGGGC GCCGCATTGC CAATGTGGTG
CCCAGCGTGA AGGGCGTGCT GGCAGGCCAG AAGGACGAGG CCCTGGGGGC TTACTACTTC
ACGCTGGCCA GCGAGTCGCC CAACCAGGGC ACGGTCACGG TTTTCGTGTC CGACGAGAAG
GGCGTTACCT ACAAGCTGAT CCTCGTTCCG CGTCCGGTGG CCGGCGAGGA AATCATCATC
CGGCCGCCGA GCGAGAAGGC TACGCCTTCG AGCCGCGCAG CCGCTGATGG CCGCACCGTC
TCCTACCAGC GCCGCATCAA GGACTTGATG CTGGTGATGG CCGACGACGA GCTGAAGGAC
AGCGTTGAAA CCATCCAGGT GAACAAGGAA GTGCCTTTGT GGAAAGAGGG GCGCTTGATC
TTGGTGGCCA AGTACATGGA TGGCGAAGTG GTGGGCGAGA AATACCGCCT GACCAACGTT
TCCCCCTCCG AAATGCTGCT GGTCGAGCAG GAGCTTTACC GCCGTGGCGT GCGCGCCATT
GCCGTAGAGC ACCACACGCT GATGCAGGGC GACGGGACGG ACATCTACAT CGTTCGGGAG
CGCAAAGACA ATGAGTGA
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| Protein sequence | MFPRSKKSLS AILLLTSLLA TEAGATQVVE NADRGHVQVN ISVNETNRLA IDGRRIANVV
PSVKGVLAGQ KDEALGAYYF TLASESPNQG TVTVFVSDEK GVTYKLILVP RPVAGEEIII
RPPSEKATPS SRAAADGRTV SYQRRIKDLM LVMADDELKD SVETIQVNKE VPLWKEGRLI
LVAKYMDGEV VGEKYRLTNV SPSEMLLVEQ ELYRRGVRAI AVEHHTLMQG DGTDIYIVRE
RKDNE
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