| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4181 |
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| Symbol | |
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| ID | 4670354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008765 |
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| Strand | - |
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| Start bp | 17805 |
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| End bp | 19154 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639826855 |
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| Product | TraB pilus assembly family protein |
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| Protein accession | YP_974017 |
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| Protein GI | 121582485 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000413656 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000231943 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGAGC CGAACGCACA AACAAAGAAA CGCCAGATGA TGCTCATCGG CGGGGCAGTG
ACCGGCATTC TCGGTCTGGC CGGGGCTGGC ATGTTCCTGT TCGACAGTGG CCCAGCACAG
CACCGCGAAA AGCCCAAGAC CGTCAGCATC ACCGCACCGG GCACCGTAGA TGACAAGGAT
GCGTGGCGTG CGCAGCAAGC GGCCAAGGAG AAGTCCAACG AAGCCTTGAT CGGGGAAGTT
AAGACCCAGC TCAAGGCCCA GGAGGAACAG AACAAGAAGC TCGCGCAGGC GCTGGAGGAA
CTGAAGGCCA ACAAGGCCGC AGCCGGTTCG GCTGGCAGCG CAACGGCTGC GAAGCCAGAT
GCTTCGGTTC TGGACAAGCC TTTGCCCATT GGCAACGGCA CCGGGCCGGG CCAGCGTGTT
CTCCAGTCAC CGAACGGCAA AGGCGGAGCC ACCACCCTAA ACCAGCCGCT CAATCAGGTG
GATGTGCCGG CGCGGCGGGA AGTGGAAATC ATCACCTTCA ACAATGCCGA GGGCAAGGGC
GCAGCGGGCG CAGCCGTTGG CGGCGCTGGT GGCATCACCG AGGTGCTGGG CTTCCCAACC
GACGAGAAGG CCAAGAAGTA CGGCACCACC TCGGGCGGGG CAGACGGCAA GAAGCAGACC
ATCGAGTTTC TGCCGGCTGG CTCCTTTGTG CGCGTGGCCA TGCTCAACGG CGTGGATGCG
CCGACAGGCG GGCAAGCCCA ATCGAACCCG CTGCCGGTGG CTTTCCATGT GCTCGATGTC
GCCAATCTGG CCAACAAGCA CAAGCTGGAC ATCAAGGATT GCCGCATCGT GGCCGCCACC
TGGGGCGATC TGTCCTCAGA GCGGATGATG GGCCGCACCG AAACCTTGGC CTGCGTTATC
AACGGCGAGG CCGTTGAAAT GGCGATCAAG GGCCAAGTGA TTGGGGAAGA CGGCAAGGCT
GGGGTTCGGG GCCGTCTCGT CACCAAGCAG GGCCAGTTGC TCGCCAATGC CCTGTTTGCC
GGCGCGCTCA GTGGTATCGG CAAAGCCTTC CAGTCCTCCG CAACCATCAC CAGCACAGGC
GGCGGCGGCA TCACGCAAAC CATCGACCCG GACAAGATCG GGCAAGCCGC TATCGGTGGT
GGGGTAGGCA GCGCGGGCCA GCAGCTCGCT CAGTACTACC TCAAGGCTGC GGACAAGCTG
TACCCCGTCA TCGAAACCGA TGGCGGCCGT ACCGTCGAAA TCCTCATCAC CAAGGGCGCT
GTTTATTCCG GCAAGGCGCT CGCCAAGGAC GATTACCGGG GCCTCCTGAA GCGCACCGGC
ACCAACTCCA GGAGATACGA AGATGATTAA
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| Protein sequence | MSEPNAQTKK RQMMLIGGAV TGILGLAGAG MFLFDSGPAQ HREKPKTVSI TAPGTVDDKD
AWRAQQAAKE KSNEALIGEV KTQLKAQEEQ NKKLAQALEE LKANKAAAGS AGSATAAKPD
ASVLDKPLPI GNGTGPGQRV LQSPNGKGGA TTLNQPLNQV DVPARREVEI ITFNNAEGKG
AAGAAVGGAG GITEVLGFPT DEKAKKYGTT SGGADGKKQT IEFLPAGSFV RVAMLNGVDA
PTGGQAQSNP LPVAFHVLDV ANLANKHKLD IKDCRIVAAT WGDLSSERMM GRTETLACVI
NGEAVEMAIK GQVIGEDGKA GVRGRLVTKQ GQLLANALFA GALSGIGKAF QSSATITSTG
GGGITQTIDP DKIGQAAIGG GVGSAGQQLA QYYLKAADKL YPVIETDGGR TVEILITKGA
VYSGKALAKD DYRGLLKRTG TNSRRYEDD
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