| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4168 |
|---|
| Symbol | |
|---|
| ID | 4670349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008765 |
|---|
| Strand | - |
|---|
| Start bp | 5186 |
|---|
| End bp | 6592 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639826842 |
|---|
| Product | TraH family protein |
|---|
| Protein accession | YP_974004 |
|---|
| Protein GI | 121582472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.391423 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTACTGA AAAAAGTAAC GGCGCTGGTG ACGGCATTTG CTTTCACCAC CTCTACCTAC
GCCATGAACA TGCAGGAGCT TTTCGACTCC GTGAATGCTC AAGGCAACGT CAGCAACCCG
GCCGTGCTGC AAGGCCAGAC GATGAACCTC TACACCGGGG GCAGTCTGTT CATGCGGATG
CCCAAGCGCA CCTACCAACT GGCGACGGTG ACGCCGCCGA GCTGGAACGC TGGGTGCGGC
GGCATTGACC TGTTCGCGGG CGGCTTCTCG TTCATCAACA AAGAGCAGTT CGTGGCCATG
CTGCGCAACA TTGGCTCGAA TGCCCTGGGC TACGGCTTCA AGCTGGCCAT TCAGAACCTG
TGCCCGACCT GCGACAACGT GATGCAGGCC CTGCAAGCCA CGGCGCAAGC TGCCAATCGT
CTCAACATGG ATTCCTGCGA GGCGGCCAAG GGGATCGTCA ATGCGGCCGT GCCCGACACC
TGGACGCGCG GCAAGCAAAA CGCGGCCAAG AACTTTGGTG TGGACACCAA CATTTTCGAG
AACATCACCG ACGCTTGGAC GAACGTGATG AACAGCGAAA GCCGGGCCAA CCAGACGGTG
AACTCGGCGG CCAGCGCGCG ACCCGAGGCG AAAGACCAGC TCCCGACCGG CAACGTGGTT
TGGAAGGCGC TCAAGAAGCT CGATGGCGTC ACCGACGAGC AACGCATGAT CCTGATGTCG
ATGATCGGCA GCATGATTTT CCCGACCGGC GACACCCCGC AACTGCCTAT CCCGCTGCTG
CGCAAGGAAA TCACGGTGGA GGCCCTGGTG GGTGCGCGTA CCACCTCCGA CACCATCACG
GTGCCGATCT GGCGTTGCGA CACCACCAGC GCGGACGGCT GCTTGAGTCC GACCGAGGAT
GAAGTGACCA CCAAGAGCTT CAAGACGATG GTGCGGGAGA AGATGGAAAA AATCTCCGAC
AAGATCGCCA ACCGTTCAGC TCACGACGAC ATGGCGGCCA CCATCGGCTT CCTGAACGCA
ACCGATCTGC CCATCTACAA GATGCTGGCC GTGACGACAA CCCTCAACAA CACCTCGATG
GCCGACGCGC TGATTGGCCG CTACCAGGAG CTGATCGCCG CCAAATACGC CGAGGTTTAC
ATCCAGCGTG CCGTCACCGA CCTGCGCGGC GCGATGGCGA AGTTCTCTGC CGCAGCCGAT
GCCACCCAGG CCGCCGAGCT GGGCAAGATG AAGCCCGAGC TGGAGGAAAT TTCGCGCGCG
GCAAAGCAGG TGCTGGCCAC TGCCTACTCG CAGACCATCA GCACCTACAA CATCGCCCAG
GAGGTGCAGT ACATGGAGCG TGCGCTGAAT GCCAACCTGT CGCAGACGCT GCGTAACTCG
CTCGCCTTCG GCAAGAGCCT GCGCTAA
|
|---|
| Protein sequence | MLLKKVTALV TAFAFTTSTY AMNMQELFDS VNAQGNVSNP AVLQGQTMNL YTGGSLFMRM
PKRTYQLATV TPPSWNAGCG GIDLFAGGFS FINKEQFVAM LRNIGSNALG YGFKLAIQNL
CPTCDNVMQA LQATAQAANR LNMDSCEAAK GIVNAAVPDT WTRGKQNAAK NFGVDTNIFE
NITDAWTNVM NSESRANQTV NSAASARPEA KDQLPTGNVV WKALKKLDGV TDEQRMILMS
MIGSMIFPTG DTPQLPIPLL RKEITVEALV GARTTSDTIT VPIWRCDTTS ADGCLSPTED
EVTTKSFKTM VREKMEKISD KIANRSAHDD MAATIGFLNA TDLPIYKMLA VTTTLNNTSM
ADALIGRYQE LIAAKYAEVY IQRAVTDLRG AMAKFSAAAD ATQAAELGKM KPELEEISRA
AKQVLATAYS QTISTYNIAQ EVQYMERALN ANLSQTLRNS LAFGKSLR
|
|---|
| |