Gene Pnap_4993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4993 
Symbol 
ID4686038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008763 
Strand+ 
Start bp9760 
End bp542 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content56% 
IMG OID639826821 
Producthypothetical protein 
Protein accessionYP_973983 
Protein GI121583565 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.639508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCG CCACCACTGA GCCTCGACAA CTGAAGCCCG AGGAGCTTTC CACCCTGGTC 
AAAGCCTTCC GCGAGGCGCG CCAATGGTCC CAGGAGCAAC TTGCTGAAAT TGCAGGTTTG 
AGTACCCGCA CGGTTCAACG AGTAGAGGAG GGCCAATCTT CCTCGCTTGA TACCCGTCGC 
GCTCTGGCCG GGGCCTTCGG CTTTGACGAT ATCGATGCTT TCAACAAGCC CTACGTCATC 
CCAACAAATG AGCAAATGGC TGCAGAGAAG GCTCGCTTCG AGAAAGAGCG CGTGACCCTC 
AAAGCTGTGC CTCTTGAGTC GGGTAAGCAG CTTGGAAAGC TGGTGGAGGG CACGTCGGCC 
AACATGTTCT CTGAAGCTGC TGGCATGCCT CAGGCTACAG AGCAGCGTTT TGCCCAACTC 
ACAGATTTCT GCCGTGAGTA TTCAGATTGC TCGGACCTTT ACTCCGCGAC CGACAAGCTG 
GATGTGTATG CCGGGCTGGA TGACATGGTT GCTGACCTAG CTAAAGATGG CTTCACCTTG 
GTCGGCGCGA CTCGGGAAGT AATGATGAAA ACTCCGGGTT CCGAGTCGGG GATCAGGGTC 
AATATCGTCT ATGTTGTCGC GTTCCCCAAA GGGCAGGAAG CGGAGAACTT AGCTGTGCCG 
AGAGCTGTGC ATTTCGGGTA A
 
Protein sequence
MTTATTEPRQ LKPEELSTLV KAFREARQWS QEQLAEIAGL STRTVQRVEE GQSSSLDTRR 
ALAGAFGFDD IDAFNKPYVI PTNEQMAAEK ARFEKERVTL KAVPLESGKQ LGKLVEGTSA 
NMFSEAAGMP QATEQRFAQL TDFCREYSDC SDLYSATDKL DVYAGLDDMV ADLAKDGFTL 
VGATREVMMK TPGSESGIRV NIVYVVAFPK GQEAENLAVP RAVHFG