Gene Pnap_4973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4973 
Symbol 
ID4686031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008762 
Strand
Start bp21609 
End bp1119 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content59% 
IMG OID639826801 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_973963 
Protein GI121583544 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones95 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGC CCTCAGCCCA CCCCAAAGCC CGCAGCCCAC GAAGTTCTAA CCCGCCAAAA 
GCCGACCGGA TTGAGGCGAT TGATCTGTTT TGTGGTGCGG GCGGCCTGAG TTGTGGCTTA
AAAAAGGTAG GCGTGCGTGT GGTGGCCGGG ATTGATGTGG ATGCGGCCTG CCAATACCCC
TACGAGGCCA ACCATCGTGG CGCAAAGTTC TTGCTACAAG ATGTGACCAC TCTGACAGGG
GCCGACTTGG AAGCACTTTG GAGCCCTACG TCAGTGCGGT TGCTGGCGGG CTGCGCTCCG
TGCCAGCCTT TTTCAAGCTA CGCCAACACA AAGGCGTCTT CTGAAAATGA CAAGTGGGGC
CTGCTTTACC AATTCGGGCG TTTGGTGACT GAAACCAAGC CGGATCTAGT GACCATGGAG
AACGTGCCGG GCCTAGCTGC GCAAGCGCCA TTCAAAGCAT TTTTGCACAC ACTCAAAACC
TTGGGCTATA GCATTGAATA TGCGGTACTA AACGCGGCTG ACTACGGTGC TCCACAACAG
CGCAAGCGCT TGGTGCTGCT GGCATCTCTG CTAGGCCCAG TGCAAATGCC TGCAGCTACG
CACCCGGGGT CGGCCAACTG GGTGACGGTG CGCAAAGCGG TTGGTGCCTT GCCGGCCATT
GGCGACGGCG AAGCATCCGC TCACGACCCT TTGCACAGGG CGGCGGCTCT TTCAGCTTTG
AACCAGCAGC GCGTGCGTGC TTCAAGGCCT GGCGGCACTT GGCGCGATTG GCCACCTGAC
TTGGTGGCCG AGTGCCACCG AAAGGCCAGC GGACGGCATT CGGCCGGCGT TTATGGGCGT
ATGGAATGGG ACAAACCTGC ACCCACCATG ACCACGCTGT GTATCGGATA TGGCAATGGG
CGTTTTGGAC ACCCGCAACA GCACAGAGGC ATTTCTCTGC GCGAGGCGGC AATCTTTCAG
TCATTCCCAA CCAGCTACAA ATTCGTGAAA CCGGGTATGC GTGTGTTGGC CAAGCCGCTA
GCGCGACTTA TCGGAAACGC CGTACCGCCT AAGCTAGGGG AGGCGGTGGG GCGGGCGTTA
CAGGCGGCGG TACGTTCGCG CGGAGGTACA ACCCGCGTTT GA
 
Protein sequence
MTKPSAHPKA RSPRSSNPPK ADRIEAIDLF CGAGGLSCGL KKVGVRVVAG IDVDAACQYP 
YEANHRGAKF LLQDVTTLTG ADLEALWSPT SVRLLAGCAP CQPFSSYANT KASSENDKWG
LLYQFGRLVT ETKPDLVTME NVPGLAAQAP FKAFLHTLKT LGYSIEYAVL NAADYGAPQQ
RKRLVLLASL LGPVQMPAAT HPGSANWVTV RKAVGALPAI GDGEASAHDP LHRAAALSAL
NQQRVRASRP GGTWRDWPPD LVAECHRKAS GRHSAGVYGR MEWDKPAPTM TTLCIGYGNG
RFGHPQQHRG ISLREAAIFQ SFPTSYKFVK PGMRVLAKPL ARLIGNAVPP KLGEAVGRAL
QAAVRSRGGT TRV