| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4801 |
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| Symbol | |
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| ID | 4685978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008761 |
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| Strand | + |
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| Start bp | 49675 |
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| End bp | 51168 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639826790 |
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| Product | transposase, IS4 family protein |
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| Protein accession | YP_973952 |
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| Protein GI | 121583526 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3666] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.00542003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 101 |
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| Fosmid unclonability p-value | 0.0251535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAT ACATTCAAGG AAGGGATCGC AGTCAAATCA CGTTACCTGG GCGCCTGGAT
GACTACATTG GACAAGACAA TCCAGTGCGC GTGGTTGATG CATTCGTTGA TGCACTCGAT
TTGGCAGAGC TCGAATTTGC GCGGATGACG CCCGCAGTGA CCGGACGTCC GGGCTATCAC
CCCGCAGTGC TCCTCAAACT CTACCTTTAC GGCTACCTCA ACCGCATCCA GTCCAGCCGG
CGCCTGGAGC GGGAGTGCCA GCGCAACATT GAACTGATGT GGCTTATTGG CTGCTTGACG
CCTGACTTCA AGACCATCGC CGATTTCCGC AAAGACAATG GTGCGGGCAT CCGCAATGTG
TGCCGCCACT TTGTGATGCT GTGCCGGGAA CTGAAACTGC TGACGCAAGC TGTTGTGGCC
ATCGATGGCA GCAAATTCAA GGCGGTCAAC AACCGTGAGC GCAACTACAC CTCCGGCAAG
ATCGAGCGGC GTGAGCGCGA GATTGACGAA AGCATCCAGC GCTACCTGAA CGCACTGCAA
ACCCTCGATC GCACCCAGCC CGCCGAATTG CCAGCCAAAA CAGAGCGCTT GCAGGGCAAG
GTTCAGAAGA TGCGTCAGCG ACTGCAAGAA CTCAAAGAGA TCAAGGCGCA GGTAGAGATG
CAACCCGATA AACAGCTATC GTTGACAGAC TCGGATGCGC GGGCGATGAG CACCCACAGC
ATGAAGGGCA CCGCCCTGGT GGGCTACAAC GTGCAGACGG TGGTGGAGAC CCAGCACCAC
CTGATCGTGG CCCATGAAGT GACCAATACC GCCAGTGACC GGGCGCAGTT AAGCAAACAA
GCGCGGGCCG CACTCGAGGC CATGGGGGTG CGTCAACTGC AAGCCCTTGC CGATCGCGGC
TATTACAGCG GCCCCGAACT CAAGGCCTGC GAAGACGCGG GCATTGCCGC CTGTGTCCCC
AAGCCCATGA CTTCCAATGC CCGGGCGCAG GCGCGCTTTG GCAAGGACGA CTTTATCTAC
ATGGCGCGTG ATGATGAATA CCTGTGCCCG GCGCGTCAAC GGGCCATTCA CCGGTTCACC
AGGGAGGAAG ATGGCCTGCA GATTCACGTC TACTGGAGCA GCGCCTGCCC AGCATGCCCG
ATGAAAGCGC AATGCACCAC CAGCAACTAC CGGCGCATCA GGCGTTGGGA GCACGAAGCG
GTGATGGAGG CGGTGCAGCG CCGCCTGGAC CGCCAGCCCG AGGCGATGAA GGTGCGAAAG
AGCACCGTGG AGCATGTCTT TGGAACGCTC AAGCACTGGA TGGGCTGGAC GCACTTTCTC
ATGCGCGGCA AAGCCAAGGT GGCAACCGAA ATGAGTCTGC ATGTTCTGGC TTACAACCTC
AAGCGGGTGA TGAAAATTCT TGGCATTGCC GAGTTGCTCA AGGCCATCAC AGAGGAGGGC
TTGAAAGCCC TTTGTTCACT TCAATGCCGA CAGGCAATTC AAGCTCGGGC TTAA
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| Protein sequence | MKRYIQGRDR SQITLPGRLD DYIGQDNPVR VVDAFVDALD LAELEFARMT PAVTGRPGYH
PAVLLKLYLY GYLNRIQSSR RLERECQRNI ELMWLIGCLT PDFKTIADFR KDNGAGIRNV
CRHFVMLCRE LKLLTQAVVA IDGSKFKAVN NRERNYTSGK IERREREIDE SIQRYLNALQ
TLDRTQPAEL PAKTERLQGK VQKMRQRLQE LKEIKAQVEM QPDKQLSLTD SDARAMSTHS
MKGTALVGYN VQTVVETQHH LIVAHEVTNT ASDRAQLSKQ ARAALEAMGV RQLQALADRG
YYSGPELKAC EDAGIAACVP KPMTSNARAQ ARFGKDDFIY MARDDEYLCP ARQRAIHRFT
REEDGLQIHV YWSSACPACP MKAQCTTSNY RRIRRWEHEA VMEAVQRRLD RQPEAMKVRK
STVEHVFGTL KHWMGWTHFL MRGKAKVATE MSLHVLAYNL KRVMKILGIA ELLKAITEEG
LKALCSLQCR QAIQARA
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