| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4795 |
|---|
| Symbol | |
|---|
| ID | 4686012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008761 |
|---|
| Strand | - |
|---|
| Start bp | 32650 |
|---|
| End bp | 38079 |
|---|
| Gene Length | 5430 bp |
|---|
| Protein Length | 1809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639826784 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_973946 |
|---|
| Protein GI | 121583520 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 118 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAT CTGAACTTAC CGGCGGTACC GGATTTACCT ACGAAGACGC AGTCGCGGCG
CACTACCTCG CGGCGATGGT CGGTGGCACG ACGGCGGCAG CCCTCGACGC GAGAGTCGTG
CAGCGGGTCG CTCAGCAGCA GGCGGACTTC GGCGAACCGC TCGACGACGT GATCGTTGAT
GCCGTCTCCT TGGCGGATGG AACGGTCATG CGGCTGTCGC TGCAGGTCAA GCGTTCGCTC
ACCATTTCCG GTTCGGCGAC CAACAGCGAC TTTCGAGATG TGATCAAGCG TAGCTGGCAG
ACACTGCAGA AGCTCGACTT TCGCGAGCAG GTGGACCGCG TCGGGGCGGT CACGGGGTCG
GTGGCAGAAG ACCCGTCCCG AGCGTTCGCG GCGGTGTGCG AATGGGCGCG GGCTTCGGAC
ACGACTGCGG CCTTCATGCA TCGTTTTGTC GATGGCGGGA ACGCTTCGGC CACTCATAGC
GCCGTGGCCG AAGCGGTTCG CGCGATTGCG CAGGACACAG GTGCGCCGCT GTCCGACGAT
CAACTGCACC GCCTGTTAGC ACACTTGGTG CTGATCCGGT TTGACTTTCT TCACGCGGGA
TCAACGTACG AAGCGGAGAC GATCGCCAGC CTGCAGCGCG CCCTGGTTCC GGGACAAGTG
GGGCGTGCCG GCGACCTGTG GAATGTGCTG CGCCAGTTCG CGCGCGATGG CGCGGGCTGC
AGCGCCGTGC ATACCCACGC ATCACTGGTG CGCGCGCTGG CTGGCTGGCG CTTCACTGGG
GCGCCTGCAT TCGCCGGCGA CATGCAGACG CTGCGCGAAA GCACGCGCCA CTGGCTCGAC
CAGCAACCCG ATGACATCGG TGGCATGCAC CTCGCGCGCC AGACGTTGCG CGATGAGCTC
GCCGAGCAAA TGGCGACCCA CCGCCTGACG CTGATCAAAG GACTACCCGG TACTGGCAAG
ACGGTGTTGC TGCGCGACCT AGTGCAAGGC CTCGTCGCCG ATGGAACCAC CTTATTCCTC
ACCGCGAACC GACTCTCCGG TCGCTGTTGG TCCGAGCATG CCCGCTCCAT GGGCTTAGCG
AATACCTCGA TCGAGCCACT GCTCGTTGAG GTCGCGGCCA CCGGTCATGC AATGCTGCTG
ATCGATGGTC TTGACCGTAT CGCACCGGAA CAGCGCGCGA TCGTGAACGA CTTGCTCGGC
CAGCTTCTGA CGAACCCGGC ACTTTCCGAC TGGCGCGTGG TCGCCACGGC GCGGGACGCC
GGCATCGAGC CCCTGCGTAA CTGGGTGCCT CCTGCGCTGC TCGCTAGCAG TGGCGTGGGT
TATGTTGATG TGGAGAATCT GACGGACGAA GAGGCGAGCT CACTCGCCGA TTCGCTGCCT
GCGTTGCAGC CACTCCTGAC TGGAGGAAAC GAGCGCGTGC GCACACTGGC ACGTCGTCCG
TTCTTCGCTG CAGTGTTAGC ACGGGGGCTC TCGCGGGCTG CGTACCCGTC CGGGTTTTCG
CCTCAGTCGG AGGTGGACCT CGTGGAGGCA TGGTGGAAGC GGGGCGGCTA CGACGCCCAT
GCGCCCCAGG CCCTAGCGCG TCAGCGGGGG CTGATCGAGC TTGCTCAGCG CAGCGCGCCC
GACCTGGGCC GCAATGTCCG CATCCGTGAC CTGTCGGCGG CGACGCGGGA CGTGCTCCCA
GCGCTGGAGG AGGACGGCCT GGTACAGCAG GTACGTACGG GTCACATAGC GCAGTTTAGC
CACGACATCT TCTTCGAGTG GTCGTTCCTC CACCTGCTGC AGGATCAGGA TGATGACTGG
ATTGCGGCCC TGACCGTGGC CGGTGAACCG CCGGCCCTGG CGCGGGTGGT GGAGCTGTTG
TCGCAGGCAA CCTATCCAAT TCCTAATCAA TGGCCGCTCG ACTTACTCGC GCTTGAGCGC
GCTCAGGTGA GGCCACAGTG GTTGCGCGCC TGGCTCGTGG CGCCCGTTTT TAGCCCACGC
TTCGCCGAGC ACGTCGACAT ATTCGCTGCA GCATTGGCAG CGAACGAACA CCGGCTCTTC
GGAAAGCTCT TAGTGTGGAT GCAGGCCGAG AAGACGACAC CCAACCCCAT GGTGCTTTCC
GGAGCCATCG GCGGCGATCT CGACGCCGCA GCGCGTATCC GTATCGCAGA CTCACTAGGC
TGGCCTTCAG ACTTCGCGGC ATGGCGCCGC CTGCTCACGT GGGCGATCGA GCAAGTTGAT
TCGATCCCGG ACAAACACTT GGGTGACCTC GTCACGCTGT TCGAAACCTG GCAGATCGCT
TTTGCAGACT ACCCCAACCC AGTGTCGCAG CGTATCGTGG CGCAGTGCGC AACCTGGTTG
CACGCGATCG AGGATGAGCA TGCGGACCGC CGGTTCAGGT ACAGCAGACC GGAAAACGAT
GCAACGCCGT GCCCGCGCGC CCCCACTCAG CTGGAGACGG AGCTACGCGC GTTGGTGCTG
CGCGCAGCGC GCGCTTACCC GGATGTGGCG AAAACCTATC TCACGAAAGT CGAGACAATT
GAGCGCTGGG CCGATAGTGC ATTCCGCGAA CTCATGACTT ACGCGCCGGT GCTGGCGCAG
ACGCATCCTG CGCAGTTCGC GCGGGTAGCC CGGCGCTGGC TCATGATGGA GCTACCGGAC
GACACATCGG CACGATGGCA TCGCGAAGCG CGTGAAGAGG GGCGCCGGCG TGAGGAGGCC
GAGGCGATCC CGCCGGAGAA CCGATCGCGA TGGGACAAGC TCGCGCTCTC GAGCATGTCG
ATCATGCACC ACTCGTTCTC CCAGCACGAC TGGGACCGGT TGTCAATCGG CGGCGACCAC
CAGGGCTTCT TCCCCGCCTC GCCGTTGCGC GAGCCGTTCC ACTCGCTGTT CATGCACGAC
TTGGCGACAG CGCTCGCGCT GATCCGCGAC GTGACGAACC ACGCCACCAT GGCGTGGCGT
CAGTTACATC GCCACAGGCA TGGCAACGCG ACACCATTGC CGCTTGTACT GGTGTTTCCG
TGGGGGCAAC AGGAGTTTTG GGGAGACGAC CGACACTATT TCTGGTTCCG TGGCCATGGC
GGGCCGCAGG TCGTGGAGTG CGCGCTCATG ACGCTGGAGC GCTGGGCCAT CGCACAACTC
GATGCCGGAC GCCCACTGGA CGAAGTTCTG CAACAGCTGC TGCAAGGGCA CACGAGCATC
GGCATCCTGG GGATTGCAGT GCATCTCGCC TTGCGAGCCA AGCAAGTGTC GCCATCGACG
TTGGCCCTTC TGCGTAGCCT CCGGCTTTGG CGGCTCGACC TACAGCGCAT GGTCCAGGAG
CAGCAATTGC AAAGCGCCGG GCTGATCGGC TTCGAAAATC GAGGCACCGA CTCGGCGCAC
CGACAAGCGG TCGCGGACAG CAACCAGATA ACGTCGCGCC GCTTAGAACT GCGCGACCTC
GTGCCGCTCT TTGTCCTCGG TGGCAATGCG ACCCTGCGGG ACGCGTGTCG CGCGGCTCTG
GACGACTTCC AGAACAGGCT GGAGTTCGCC TACAAGGAAG AGGAACAGGA TACCGAACAT
GTGGCCGAGC TGCGCCGCAC GGCCGAATTA TGGTCCGAAC TGGGCCATAT CGAGAACTAC
ACCGCTGAGC CGGTACCCGG CCGTGACGAT GTAGTTCAGA TCTCGATGAG CAGTTCACGG
CACGAAGCTC CCGAGGTGCA AGCGTCCCTG CAGCACCATG CGCAGGTGAC GCGCGAGATG
GAGTTGTGGC TGTGGGTGGA CAAGTGCTTC ACGTCTCGCC GCTGGGCGCC GGGCTTCTCG
GTGGATGAGG CCATCGAGCG TGCAAAGGAG CTAACGGAAA CGGCCACTGC AGGAAGGTCA
ATATCGTTTA TGCCCGGCAG CGGATTCACG GAAGGGGCCA TTGCGGGAAC GGCAGCGGCC
GTGATTTGCT TTGTCGATGC TGGCGGGAAC GAGGTCTGGG CCAATGACAC CATCGAAAGC
TTCCGCGTTG CGCAGGACGA AATGTCCGAC GACATGTTTG CCGGATCGGT GATCCCTTGG
CACTCGAAGA TCTTCGTGGC GCATGCGTTG GCCGCACGTA TCAAGTCGGC CCGCGAATAT
CCTGACGATC GCGAATCACT CTATCGCTTG ATCGCGCACC CGCTCGATGC GGTCTCGTTC
GTTGCGCTGG CCGGTGTCGT CGGTTGCTGG GAGCGCGATG CGCGGTTCGC TTGGTGCAGC
CTGAGCCTCG GGCTGCGGTT GGCGCAGCTC GTAAGCAGGC GAGATATTTA CCGGCTCGAC
GCTGAGGTGC GGCGGCGGGT GGACGCGGAC CGCCGGGCCG CGATATTGGC AGCGGTTCTC
GACGAGTACC GGGCGCAAGG GCCGTTGCCT GCCTGGGTGC GTCCACGGCC TTCATGGGTC
CGGGCTACGC CGGACGCTGA GAATCCGCAG GCTCTTGACG GGTGCGAGGA AGACGGGTGG
CATAGTACCG ACGATCTGTG GGACAGCCAG TACGCTGCGA AGGTCTTGCA GAAAGTCCTG
GTGGCGGCGG TCATGGCGAG TGAGGGCCGT GCGCACTATG TGGACGCCCT CGAGGCGTTT
GTCGGCTGGA CCCTCGACAC AATCAACCCG GCGTGGCGAA CCGAGCGTCG CCGGGGGCGG
GAACGTGGCG ATGGAAACCT CTACGAGTGG GAGGACCAGC TGGGTCGGAC GATCGCAAGC
GTTGCACCCC ATCTTCCCAG CGACGAGACC TTGCAGAGGT TGCTAGGACC GATTTTTGCA
CAGCCCGACG AGATTGCGAT GCGGTTGCTC GCGCCATTCG CTTTGTCGCT GGTCTGCGGC
GAAATCCTGG ATGGGCCGGA GATCCGGGAT GACACTCTAC AGCTGCTGCA AGCCGTGCTC
GAACGAACGC TGGAGCACGA CGACCTGCGC CGCTCGCAGT ACAACGACGG GCGCATGGGC
GGCTTCCAGC TCCCTGAGCT GGTCAAGTCG CTGCTCTTCG TGGTCGTCGA GCACGCCCCC
GGCGCCGCGC GTTTCGCCAA CGGCCGCTGG GACGACCTTG GCCGGGTGAT GCCCCTGGTC
GATCGTATGG TGCGCGCCAT CGGCTGGCAC CCCTACGTCG CGCGCCAGTT TGTCACGCTG
TGCGAACGTT CCGGTGCAGC CTACCCGGCC GATACGTTCG CCGACCAAGT GATGACGCAG
ATCGTCGATG GGCACCTGCC TTCTGGCTGG AAGGGCTCCT CGGTACCAGC CGCGATCGCT
GCTCTGGTTC AGGCGCACGC CGACCGACAG CATCCGTTGC CAGCTGCTCT GGCTCGCAAG
CTGCTGCAGG TTCTGGACGC GCTGGTCGAT CTTGGCGACC GTCGCAGCGC AGCCTTGCAA
CAGAGCGAGT CCTTTCGTGG CGTGCGCCTC GCCGCGCCAG TCCAGTCTGA GGCGCGCTTC
GCGAGAAGGG CGTTCACTTT CGGCCTGTAG
|
|---|
| Protein sequence | MTSSELTGGT GFTYEDAVAA HYLAAMVGGT TAAALDARVV QRVAQQQADF GEPLDDVIVD
AVSLADGTVM RLSLQVKRSL TISGSATNSD FRDVIKRSWQ TLQKLDFREQ VDRVGAVTGS
VAEDPSRAFA AVCEWARASD TTAAFMHRFV DGGNASATHS AVAEAVRAIA QDTGAPLSDD
QLHRLLAHLV LIRFDFLHAG STYEAETIAS LQRALVPGQV GRAGDLWNVL RQFARDGAGC
SAVHTHASLV RALAGWRFTG APAFAGDMQT LRESTRHWLD QQPDDIGGMH LARQTLRDEL
AEQMATHRLT LIKGLPGTGK TVLLRDLVQG LVADGTTLFL TANRLSGRCW SEHARSMGLA
NTSIEPLLVE VAATGHAMLL IDGLDRIAPE QRAIVNDLLG QLLTNPALSD WRVVATARDA
GIEPLRNWVP PALLASSGVG YVDVENLTDE EASSLADSLP ALQPLLTGGN ERVRTLARRP
FFAAVLARGL SRAAYPSGFS PQSEVDLVEA WWKRGGYDAH APQALARQRG LIELAQRSAP
DLGRNVRIRD LSAATRDVLP ALEEDGLVQQ VRTGHIAQFS HDIFFEWSFL HLLQDQDDDW
IAALTVAGEP PALARVVELL SQATYPIPNQ WPLDLLALER AQVRPQWLRA WLVAPVFSPR
FAEHVDIFAA ALAANEHRLF GKLLVWMQAE KTTPNPMVLS GAIGGDLDAA ARIRIADSLG
WPSDFAAWRR LLTWAIEQVD SIPDKHLGDL VTLFETWQIA FADYPNPVSQ RIVAQCATWL
HAIEDEHADR RFRYSRPEND ATPCPRAPTQ LETELRALVL RAARAYPDVA KTYLTKVETI
ERWADSAFRE LMTYAPVLAQ THPAQFARVA RRWLMMELPD DTSARWHREA REEGRRREEA
EAIPPENRSR WDKLALSSMS IMHHSFSQHD WDRLSIGGDH QGFFPASPLR EPFHSLFMHD
LATALALIRD VTNHATMAWR QLHRHRHGNA TPLPLVLVFP WGQQEFWGDD RHYFWFRGHG
GPQVVECALM TLERWAIAQL DAGRPLDEVL QQLLQGHTSI GILGIAVHLA LRAKQVSPST
LALLRSLRLW RLDLQRMVQE QQLQSAGLIG FENRGTDSAH RQAVADSNQI TSRRLELRDL
VPLFVLGGNA TLRDACRAAL DDFQNRLEFA YKEEEQDTEH VAELRRTAEL WSELGHIENY
TAEPVPGRDD VVQISMSSSR HEAPEVQASL QHHAQVTREM ELWLWVDKCF TSRRWAPGFS
VDEAIERAKE LTETATAGRS ISFMPGSGFT EGAIAGTAAA VICFVDAGGN EVWANDTIES
FRVAQDEMSD DMFAGSVIPW HSKIFVAHAL AARIKSAREY PDDRESLYRL IAHPLDAVSF
VALAGVVGCW ERDARFAWCS LSLGLRLAQL VSRRDIYRLD AEVRRRVDAD RRAAILAAVL
DEYRAQGPLP AWVRPRPSWV RATPDAENPQ ALDGCEEDGW HSTDDLWDSQ YAAKVLQKVL
VAAVMASEGR AHYVDALEAF VGWTLDTINP AWRTERRRGR ERGDGNLYEW EDQLGRTIAS
VAPHLPSDET LQRLLGPIFA QPDEIAMRLL APFALSLVCG EILDGPEIRD DTLQLLQAVL
ERTLEHDDLR RSQYNDGRMG GFQLPELVKS LLFVVVEHAP GAARFANGRW DDLGRVMPLV
DRMVRAIGWH PYVARQFVTL CERSGAAYPA DTFADQVMTQ IVDGHLPSGW KGSSVPAAIA
ALVQAHADRQ HPLPAALARK LLQVLDALVD LGDRRSAALQ QSESFRGVRL AAPVQSEARF
ARRAFTFGL
|
|---|
| |