Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4792 |
Symbol | |
ID | 4685981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008761 |
Strand | - |
Start bp | 29627 |
End bp | 30814 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639826781 |
Product | hypothetical protein |
Protein accession | YP_973943 |
Protein GI | 121583517 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 157 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAATC CGAAACGTTT TTCGCTGGCC AGGCGCCGGC GAGGCATGAC CAAACGGGAG ATTGCTGAAA GCATCGGCGT CAGCGAGCGC TCCGTATCTG CTTATGAAAA GGGTGACCAA GAGCCGGAGC CTTCCAATGT TCAGAGGATG ACGAAGGCGC TGAATTTCCC GGAAGCCTTT TTCCATGCGG CGGACCCTGA AGAGCTGACC ATGGGCATTG CAAGCTTTCG CTCCATGTCA AAGATGAGCG CACGCCAACG CGACTCTGCA TTGGGATCCG GCTCGATTGG GCTACTGCTC AACGAATGGC TGGAAAAAAA ATTCAACCTG CCCGAGCCGA ACCTTCCCGA TCTGGGCCGT GAGTCAGGCG TTCTGACTGG ACTATCTAGC CGCGAAAGCT ACGAAGACGA TATTCCCTTT CCATCGAAAT CGACCGCAAA TGCACCAGAG GCGGCGGCAG AGGCGTTTCG GTCGCACTGG GGCCTGGGCG AGTTGCCTGT CAAAAACATG ATCACCCTTT TGGAGTCAAA GGGTGTGCGC GTTTTCTCCC TGGCCATTGA TGCCAAGGAG GTTGATGCGT TTTCGATGTG GCACGGCGGC AAGCCGTTCA TGTTCCTCAA TACGTTCAAA TCGGCCGAGC ACTGCCGGTT CGATGCTGCG CACGAACTCG GGCACCTGGT CCTGCATCGC CATGGCCAGA CGCAAGGGCC GGAGTTGGAG CGCGAAGCCA ATGCCTTTGC CTCGGCGTTT TTGATGCCCA GAAAGAGTGT GCTGTCGAAC GCACCGCGCG TCGCCACCCT TCCAGGGCTG GTGCGCGCAA AACACTATTG GAAGGTTTCG GTCGCCGCTT TGAATTACCG GCTGCATGCG CTGGGCATGA CGTCGGACTG GGTCTACCGA ACGCTGTGCA TTCAACTGGC CGAAGCGGGC TACCGCACCA AAGAGCCCGA AGAGGCCACT CACGAGAAGT CGTTGATCCT TGAGAAGGTA TTCAAGGCAC TGCGCGATGA GGGCGTTTCG AAATTCGACG TGGCTGACGA ACTACTGATT CCCATTGAGG AAATCAACGC ATTGACGTTT AACCTCATGC TGAACTTGTT GAGTGGCGGC CGCAAAGGCA GCGATCCTGC TACCGAAAAG GGACGTGGTG CAATTCGCCT GGTTCACGTC TCGGACGCTT CGATTTAG
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Protein sequence | MFNPKRFSLA RRRRGMTKRE IAESIGVSER SVSAYEKGDQ EPEPSNVQRM TKALNFPEAF FHAADPEELT MGIASFRSMS KMSARQRDSA LGSGSIGLLL NEWLEKKFNL PEPNLPDLGR ESGVLTGLSS RESYEDDIPF PSKSTANAPE AAAEAFRSHW GLGELPVKNM ITLLESKGVR VFSLAIDAKE VDAFSMWHGG KPFMFLNTFK SAEHCRFDAA HELGHLVLHR HGQTQGPELE REANAFASAF LMPRKSVLSN APRVATLPGL VRAKHYWKVS VAALNYRLHA LGMTSDWVYR TLCIQLAEAG YRTKEPEEAT HEKSLILEKV FKALRDEGVS KFDVADELLI PIEEINALTF NLMLNLLSGG RKGSDPATEK GRGAIRLVHV SDASI
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