Gene Pnap_4780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4780 
Symbol 
ID4685971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008761 
Strand
Start bp18013 
End bp18414 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content63% 
IMG OID639826769 
Producthypothetical protein 
Protein accessionYP_973931 
Protein GI121583505 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value0.533353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones141 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGCA TGAAAACCCT GAAACGCTTC TCTGCAGCGC TCGCCATCGC CGCTGCATCC 
CATGCCGCCA GTGCCCACGA AACCGGGCTG AGCAAACAGC ACGCAGCCTG CATGGACAAG
TCCGGCGGCG TGACGATGGG CATGATCGAA TGCATCACTG CGGAAAACCA CCGGCAGGAT
GCCCTGCTCA ACAAAGCCTA CAAGGCCCTC ATGGCCGAGC TGCCGCCCCC GCGCAAGACA
CAGCTGCAGG AAGCTCAACG GGCCTGGATC AAATACCGCG ACGCCAACTG CGCCTTCTAC
GATGACCCGG ACGGTGGAAC GCTGGCCCGC GTCAACGCCA ACTCCTGCAT GATGGCCGCC
ACGGCCGACC GTGCCCGCGA GCTTGAAAGT TTCAGGCAGT GA
 
Protein sequence
MCRMKTLKRF SAALAIAAAS HAASAHETGL SKQHAACMDK SGGVTMGMIE CITAENHRQD 
ALLNKAYKAL MAELPPPRKT QLQEAQRAWI KYRDANCAFY DDPDGGTLAR VNANSCMMAA
TADRARELES FRQ