Gene Pnap_4779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4779 
Symbol 
ID4685996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008761 
Strand
Start bp16835 
End bp17920 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content64% 
IMG OID639826768 
Producthypothetical protein 
Protein accessionYP_973930 
Protein GI121583504 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value0.975397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones138 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCG CCAGCAACAC CCCGCTCTCT CTGCCCGAGG GCTACGCCGA CTGGCTGGCC 
CAGCTCAAGG GCCAGATTGT CCAAGCCCGG CAACGCGCCG CGCTCGCGGT CAATGCCGAG
CTGGTGCAGC TCTACGGCCG CATCGGGCGC GACATCCTGC AGCGCCAACA AACGCAAGGC
TGGGGCACCA AGGTCATTGA CCGGCTGGCC CGTGACCTGA AGGACGGTTT TCCCGACATG
CGCGGCTGGT CGCCGAGCAA CCTCAAGTAC ATGCGGTTTT TTGCCCAGCA TTGCCCGGAC
GGCCAATTTG GTCAGCAGCC TGCTGACCAA TTGCCGTGGT TCCATGTCGT GACGCTGCTG
ACCCAGCTGG ACAACGCCGC CGACCGCGAG TGGTATGCGG CCCAGACAGT CCAGCACGGC
TGGTCGCGCA CCACGCTCGC CCTGCACATC AAGAACCGGC TGCAGCAGCG TCAGGGCGGC
GCGGTGACCA ACTTTCAGGC CCGCCTGCCC GCTGCCGAGT CGGCGCTGGC CCGCGAAACG
CTCAAGGATC CATACCTGTT CGACTTCCTG GGCCTGGGCG ACGATGCGCA CGAGCGAGAA
ATAGAAAACG GCCTGATTCG CCACATCACG CGCTTCCTGC TGGAGTTGGG CGCCGGCTTT
GCCTTCGTGG GCCGGCAGTT CCGGCTGGAA GTGGCCGGTG ACGAGTTCTT CATCGACCTC
CTTTTTTATC ACACGCGCCT GAAATGCTAC GTGGTGGTCG AACTCAAGGC GACGGCCTTC
AAGCCCGAGC ACGCCGGCCA GCTCAATTTT TACCTGGCGG CGGTCGATGC GCAGGTGAAG
GCGCCAGATG ACAAGCCAAC CATCGGCCTG CTGCTGTGCA AGCAGCAAAA CCGGCTGGTG
GCCGAATATG CGCTCTCGGG CATCGACAAG CCCATCGGCG TGGCCGAGTA CCAGCTGCTG
CGCGACCTGC CGGCCACCCT GGAGCAGAGC CTGCCCAGCA TTGCCGACAT TGAAGCGGAG
TTGTCGAGCG ACGTGGGCGC ATTGCAAGCC CTGGACGCAC CGGATGAGCC CAGTGACCAG
CCTTAA
 
Protein sequence
MKPASNTPLS LPEGYADWLA QLKGQIVQAR QRAALAVNAE LVQLYGRIGR DILQRQQTQG 
WGTKVIDRLA RDLKDGFPDM RGWSPSNLKY MRFFAQHCPD GQFGQQPADQ LPWFHVVTLL
TQLDNAADRE WYAAQTVQHG WSRTTLALHI KNRLQQRQGG AVTNFQARLP AAESALARET
LKDPYLFDFL GLGDDAHERE IENGLIRHIT RFLLELGAGF AFVGRQFRLE VAGDEFFIDL
LFYHTRLKCY VVVELKATAF KPEHAGQLNF YLAAVDAQVK APDDKPTIGL LLCKQQNRLV
AEYALSGIDK PIGVAEYQLL RDLPATLEQS LPSIADIEAE LSSDVGALQA LDAPDEPSDQ
P