| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4744 |
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| Symbol | |
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| ID | 4685935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | + |
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| Start bp | 127663 |
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| End bp | 128835 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639826735 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_973897 |
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| Protein GI | 121583466 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTT TTCACCTCCG TTTCGTCCAA ATCTTGTCCG TTGCCGCACT GGGCATGGCA
ACCACCGTCG TCCATGCACA GGAAAAAATC AGGATAGGCT TCATGCTTCC GTATAGCGGC
ACTTTTGCCG CCCTCGGCGT CGCCATCGAA AACGGATTCA AACTGTATGT CGCCGAAAAC
GGAGGCAAGC TGGCTAACCG CGAAGTCGAG TATTTCAAGC TCGACGACGA ATCGGATCCG
TCCAAGGCGA TCCAGAATGC GAACCGCCTG GTCCAGCGCG ACAAGGTCGA TGTGCTGATC
GGTTCCGTGC ACTCGGGTGT GGCGCTGGCA TTGACCAAGG TCGCCAAGGA CAACGACGTC
ACGCTCATCG TTCCGAACGC CGGCGTGGGC GCCGTGACCG GGGCCCTGTG TGCACCCAAC
ATTTTCCGCT CGTCCTACTC GGCCTGGCAA ACGGCATACT CGATGGGCAA GGTCGCAGCC
CAGAAAGGCA AGAAAACGGC GATGACCATC ACTTGGAAAT ACTCGGCCGG CGAGGAACAG
GTCGCGGCAT TCCGCCAGGG CTTCGAGGAA AGCGGCGGCA AGGTGCTGCG CGACCTGAAC
GTGCCGTTTC CGAATGTGGA GTTCCAGGCC ACCCTGACCG AAGCGGCATC GGCCAAGCCG
GACGCCATTT TCGCTTTCTT CGCCGGCGGA GCCGCAGTCA AGTTCGTGCA GGATTATGCC
GCCGCCGGCC TCAACAGGTC GATCACGCTG TACGGCTCGG GCTTCCTCAC CGACGGCACG
CTTCAGGCGC AGGGCAAGAG CGCACAAGGA ATCCTGACGA CGCTGCACTA CGGCGATGGC
CTGAATACGC CGCGCAACAA CGCATTCCGT ACCTCTTACG CGAAGACCTA CAAATTGCAG
CCGGATGTCT ACGCTGTCCA GGGCTACGAC GCCGCGCAAA TGTTTGCGGC GGGCGTCAAG
GCAGTCGGCG GCGACGTCAA GCAGAAGGAC GCCTTGCGCA AAGCCATCCG CGCAGCCCGG
ATCGACAGCC CGCGCGGCAG CTTCGTGCTG TCCAAGGCCG GCAATCCGGT CCAGGACTTC
TACCTGCGCG AAGCGGTCGG CAACGAGAAC AAGGTGATTG GCATCGCCGT CAAGGCCCTG
GCCGACCCGG CCAAGGGCTG CCGCATGCTC TGA
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| Protein sequence | MATFHLRFVQ ILSVAALGMA TTVVHAQEKI RIGFMLPYSG TFAALGVAIE NGFKLYVAEN
GGKLANREVE YFKLDDESDP SKAIQNANRL VQRDKVDVLI GSVHSGVALA LTKVAKDNDV
TLIVPNAGVG AVTGALCAPN IFRSSYSAWQ TAYSMGKVAA QKGKKTAMTI TWKYSAGEEQ
VAAFRQGFEE SGGKVLRDLN VPFPNVEFQA TLTEAASAKP DAIFAFFAGG AAVKFVQDYA
AAGLNRSITL YGSGFLTDGT LQAQGKSAQG ILTTLHYGDG LNTPRNNAFR TSYAKTYKLQ
PDVYAVQGYD AAQMFAAGVK AVGGDVKQKD ALRKAIRAAR IDSPRGSFVL SKAGNPVQDF
YLREAVGNEN KVIGIAVKAL ADPAKGCRML
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