Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4743 |
Symbol | |
ID | 4685934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008760 |
Strand | + |
Start bp | 126592 |
End bp | 127617 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639826734 |
Product | Nitrilase |
Protein accession | YP_973896 |
Protein GI | 121583465 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAAAAT TTGCAAAATT CAAAGCGGCC GCGGTGCAGG CGGCGCCCTG CTTTCTCGAT ACGCCCGCTA CCATGCAGAA AGTTGGCAAG CTGGTTCGCG AAGCCGCTTC CGCCGGCGCC AGCATTGTGG TTTTCCCCGA AGTATTCGTC TCCGGCTACC CTTACTGGAA CTGGCTCAAG AATCCTCTCG ACGGCAGCGC CTGGTTTCAG CGTCTTTACT TCAGCGCCAT CGACGTGCCC GGTCCGGAGG TCGAAGAGCT TTGCCGCCTG TCCCGTGACA ACAATATCCA CATTGCCATT GGTGTCAACG AGCGCGGCGC CAAGAGCGTG GGCACGATCT ACAACACCAA TCTGCTGTTC TCGCCCGAAA AAGGCCTGAT CAACCGCCAG CGCAAACTGG TGCCGACTTT CGCCGAAAAG TTGTCGTGGA CCGCCGGCGA TGCGCATGGC CTGCGCGTGT CGGAAACCGA GATCGGTCCG ATCGGCATGC TGGCCTGCGG CGAGAACACC AACACGCTGG CGCGCTTCGC GCTTCTCGCC GAAGGCGAAC TGCTGCACAT CGCCAATTTC GTCGCGTTTC CCTTCGTTTC GAGCTACGAC ATGCCGTCCG CCATCAAGAC GCGCATCGGT GCGCATTCGT TCGAAGGCAA GGTGTTCAGC ATCGTCGCGT GTTCGGCCAT GTCGCCCGAG ATCGTCGATG CGATTGCCTC GAACGACGAA GAGCGCGAGC GCATGTCCGG CTCGCCCAAC GCGTTCTCGG CGATTTTTAA TCCGCACGGC GTGATCATCT CCGACCCCCT GGTGGACGTC GAAGGCATCA CGTATGCCGA CATCGACCTG GCCGAGTGCA TCGCGCCCAA GCAATACCAC GACATCCTGG GCCACTACAA CCGGTTCGAC ATTTTCAGTC TTCAAATCAA CCGCACCGAG CAATCTCCGA TTCGGTATAT CGGCGATGCC ACAGAGCCCT CCGGCGTCGG CGCTTCCGAG CATGAGACCG CGCCTGCCGC AATTCCGGCG CAATAA
|
Protein sequence | MPKFAKFKAA AVQAAPCFLD TPATMQKVGK LVREAASAGA SIVVFPEVFV SGYPYWNWLK NPLDGSAWFQ RLYFSAIDVP GPEVEELCRL SRDNNIHIAI GVNERGAKSV GTIYNTNLLF SPEKGLINRQ RKLVPTFAEK LSWTAGDAHG LRVSETEIGP IGMLACGENT NTLARFALLA EGELLHIANF VAFPFVSSYD MPSAIKTRIG AHSFEGKVFS IVACSAMSPE IVDAIASNDE ERERMSGSPN AFSAIFNPHG VIISDPLVDV EGITYADIDL AECIAPKQYH DILGHYNRFD IFSLQINRTE QSPIRYIGDA TEPSGVGASE HETAPAAIPA Q
|
| |