| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4737 |
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| Symbol | |
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| ID | 4685928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | - |
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| Start bp | 118166 |
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| End bp | 120811 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639826728 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_973890 |
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| Protein GI | 121583459 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACA GCTTACTGAA CAATGAAAGC GCTCGCCAGG GCATGGTCCG AGTCCGGGGT
GCGCGCGAGC ACAACCTGAA AAACGTTGAT GTCGATATTC CTCGCGACGC ACTGGTGGTG
TTCACAGGCG TTTCCGGTTC AGGAAAATCC TCGCTTGCGT TCGGTACCCT GTACGCTGAG
GCGCAGCGCC GATACTTTGA ATCCGTCTCT CCGTATGCTC GGCGCCTCAT CGACCAAGTC
GGCGTTCCCG ACGTGGATTC GATAGAGGGA CTGCCTCCCG CCGTCGCACT GCAGCAGCAG
CGCGGAACTG CCAACGCCCG CTCGTCGGTG GGAAGCGTGA CGACCATTTC CAGCAGCGTG
CGGATGCTTT TTTCAAGGGC GGGAACGTAT CCGCCAAGCC AGCCCATGCT TTACGCAGAA
GACTTTTCGC CCAACACGGT GCAAGGGGCG TGTCCGCAGT GTCACGGCCT GGGCCGGGTC
TTTGATGTCA ATGAAAAGAC CATGGTGCCC GACGATTCCT TGACCATTCG CGAGCGTGCG
GTGGCCGCAT GGCCGACGGC CTGGCAAGGC CAGAACTTGC GCGACATTCT GGTTTCACTC
GGTTTTGACG TCGACACGCC CTGGCGAGAC CTGCCTGCCA AGGACCGGGA ATGGATACTG
TTTACGGACG AGCAGCCCAC CGTACCCGTC TATGCGGGAT TGACCCCAGA GCAGACGCGC
GCAGCCCTGC GCCGCAACGC CGAACCCAGC TACCAGGGAA CATTCATCGG CGCTCGAAAA
CACGTACTGC ACACCTTTGC CACCACACAC AGCGCATTGA TGAAAAAGCG GGTCTCAGGT
TTCATGGTCG GCAGTGCGTG CCCCCTCTGT CACGGCAAGC GCCTCAAGCG CGAATCCCTT
TCGGTCACTT TCGCGGGGCT GGACATTGGC GAGTTGTCGC AGTTGTCCCT CGACCGCCTG
GCCTTGATTC TTGCCCCGGC AGCCAGCGGC ATATTTGACA TCCCCGAAGT ACAGGTCCCA
GCAAACTTGA GCCGGGAGGA AGCACGAAAA GACACGGCCC GTCGGGTGGG TGCCGGTGGC
TCGTCACATG CTGGGGCCAG CGACGTGCGG CGCACGGTCA ACCTGTCACC GGAAAAGCGC
ATGGCAGCCC AGCGCATGGC GAGCGACCTG ATGGCGCGCA TCACATCGCT CCAACGCCTT
GGCCTGGGAT ACCTGTCTAT CGACCGGGCG ACCCCGACGC TCTCGCCCGG AGAATTGCAG
CGCCTTCGCC TCGCGACCCA AATCCGCTCC AACCTGTTCG GGGTGATTTA CGTGCTGGAT
GAGCCATCCG CAGGGCTGCA CCCTGCGGAC AACGAAGCGA TGATGGAGGC GTTTGAGCAG
TTGAAGCGTT CGGGCAATTC AGTCTTCGTT GTCGAGCATG ACCTGGACAT GATGCGCTGC
GCGGACTGGT TGGTCGACGT CGGTCCGGCA GCGGGAGAAG GTGGCGGTGA AGTGCTGTAC
AGCGGACCCC CAGCAGGGTT TGAGCAGGTG CACAACTCCC AGACCGCAAG GTATCTGTTC
GGCCGAGAGA ATGAGCTGCA GCGCACGCCC CGGACCCCAA CGGACTGGCT GGCGCTGAGC
GCCGTTTCGA TGAACAACCT GGCTGGCATC GATGCACGGT TTCCCTTGAA AGCGATGTCT
GCCGTAACGG GCGTGTCCGG GTCGGGAAAG TCCAGCCTTG TGACCCAGGC GCTGGTTCAG
CTGGTACGGG AGAGCCTGGG AAGCGAAACC CCGCATGCCG AGGAAGAACT CGACGCGCTG
CAAGACTTTG CACTGCCTCG CGCCAGCGGC CGCATCGCGA GCGGAATGGA GGGCATCAAA
CGACTCGTGC ATGTTGACCA AAAGCCCATT GGCCGCACGC CTCGCTCCAA CTTGGCCACC
TACACGGGAC TGTTCAATCA TGTCAGAAAG CTTTTCGCGG ACACCCCTGC CGCGCGGTCG
CATGACTTCG ATGTGGGACG CTTTTCGTTC AATGTGGCCA AAGGACGCTG CGAAACCTGC
GAGGGCGAAG GGTTTGTATC GGTCGAGCTT CTTTTCATGC CCAGCGTGTA CGCACCGTGC
CCTGCGTGCC ATGGCGCGCG GTTCAACGAG GACACACTGC AGGTAACCCT GCGGGGCAAG
AATATTGCTG ATGTCCTGCA CATGACGGTT GAAGACGCAC AAGCGTTTTT CTGTAATGAA
GCCGTCATTG CGAAGCCTCT TAAGCTGCTG AGCGACATCG GCCTGGGCTA CCTGCGTCTG
GGCCAGCCGG CGACCGAGCT CTCGGGTGGT GAAGCACAGC GCGTGAAGCT TGCCACTGAA
TTGCAGCGGG CACAGCGCGG TGACGCTCTG TATGTACTTG ACGAACCCAC CACGGGCCTG
CATGCCGCCG ACGTCGATAA GTTGCTTTCT CAGCTGCAGG GGCTGGTTGA CGCCGGCAAC
ACCGTCATTG TCGTGGAGCA CGATATGAGG GTGATAGCCG CGTGTGACTG GGTGATTGAC
TTGGGGCCAG GAGGAGGCAC GGCAGGAGGA AAAATCGTTG CAAGCGGAAC CCCCGTGGAC
GTTGCGCGCA ATGGCACCAG TCTTACGGCA ACTTACCTCA GAAAAAGCAT GGCGCGGTTA
ACGTAA
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| Protein sequence | MNNSLLNNES ARQGMVRVRG AREHNLKNVD VDIPRDALVV FTGVSGSGKS SLAFGTLYAE
AQRRYFESVS PYARRLIDQV GVPDVDSIEG LPPAVALQQQ RGTANARSSV GSVTTISSSV
RMLFSRAGTY PPSQPMLYAE DFSPNTVQGA CPQCHGLGRV FDVNEKTMVP DDSLTIRERA
VAAWPTAWQG QNLRDILVSL GFDVDTPWRD LPAKDREWIL FTDEQPTVPV YAGLTPEQTR
AALRRNAEPS YQGTFIGARK HVLHTFATTH SALMKKRVSG FMVGSACPLC HGKRLKRESL
SVTFAGLDIG ELSQLSLDRL ALILAPAASG IFDIPEVQVP ANLSREEARK DTARRVGAGG
SSHAGASDVR RTVNLSPEKR MAAQRMASDL MARITSLQRL GLGYLSIDRA TPTLSPGELQ
RLRLATQIRS NLFGVIYVLD EPSAGLHPAD NEAMMEAFEQ LKRSGNSVFV VEHDLDMMRC
ADWLVDVGPA AGEGGGEVLY SGPPAGFEQV HNSQTARYLF GRENELQRTP RTPTDWLALS
AVSMNNLAGI DARFPLKAMS AVTGVSGSGK SSLVTQALVQ LVRESLGSET PHAEEELDAL
QDFALPRASG RIASGMEGIK RLVHVDQKPI GRTPRSNLAT YTGLFNHVRK LFADTPAARS
HDFDVGRFSF NVAKGRCETC EGEGFVSVEL LFMPSVYAPC PACHGARFNE DTLQVTLRGK
NIADVLHMTV EDAQAFFCNE AVIAKPLKLL SDIGLGYLRL GQPATELSGG EAQRVKLATE
LQRAQRGDAL YVLDEPTTGL HAADVDKLLS QLQGLVDAGN TVIVVEHDMR VIAACDWVID
LGPGGGTAGG KIVASGTPVD VARNGTSLTA TYLRKSMARL T
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