Gene Pnap_4728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4728 
Symbol 
ID4685919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp108970 
End bp109374 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content58% 
IMG OID639826718 
Producthypothetical protein 
Protein accessionYP_973881 
Protein GI121583450 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID[TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.467083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGT TGATTCCTGA AGTGACCACG GACGTATTGC AGGCCTTTGC CGACGCGTGG 
AATCGCCACG ATGTCGATGT TCTCATGTCG TTCATGACAG AGGACTGCGT CTTCGAGTCC
TCTGCTGGCG CTGATGTCTG CGGCACCCGG TACGTTGGCA GACAAGCCGT GCGAGCGGGC
TTCGCGCAGG TCTGGGGGGT CTTTCCCGAT GCCCACTGGG GCAATGTGCG CCATTTTGTC
CATGGAAACC GAGGCGTCTC CGAGTGGACG TTCACGGGAA CACGTGCGGA TGGAACCCGC
GTCGAAGTTC ATGGTTGTGA TCTGTTCACC TTTCGCGACG GCAAGATCTT GCTGAAGAAC
TCTTACCGCA AGAACCGTCC ACCCAGTGAG AACTCAACGC GATGA
 
Protein sequence
MQMLIPEVTT DVLQAFADAW NRHDVDVLMS FMTEDCVFES SAGADVCGTR YVGRQAVRAG 
FAQVWGVFPD AHWGNVRHFV HGNRGVSEWT FTGTRADGTR VEVHGCDLFT FRDGKILLKN
SYRKNRPPSE NSTR