Gene Pnap_4726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4726 
Symbol 
ID4685917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp106744 
End bp107763 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID639826716 
Producthypothetical protein 
Protein accessionYP_973879 
Protein GI121583448 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.62609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATCA TCAAGCATCA AGGGGTCATC CTTGCATCCG CGCTGGGGCG CGGGGCAGCA 
GCCGTCGCGG GCGCATGGCT GCTGATGCTC GGTCATGCCG CTTCATCGCC TTTTCCCGAT
CAACCGAAGA CAACGGCTGC ACCGCGCAGC GCAGCACTGG CGCCCGTGCA GCGGACCGCC
TGTCCCTTGC AGCCGGCAGC GGCAGCAACC GGCAGGAAGG ACGGGAAATT TTCTCTGCAG
GCCGACTTGT CCGGCATGAC CGCGAAAAAT ATCGCCTCGT TCATTGTCCT GGGCAAGGAA
GCGGCTGCGG CAGGCCGGCC GCGCGACGCC GAAGTGGCGT TCCTGATGTC GTGCCGGGTG
GCCGACAAGC TCAAGGGAAT GGACTCCGTC GAGTCCGCCG ACGCGAAGTA CCAGCTGGGC
TGGCTTTATG CGGGACTCGC CTTGGAGGAC GGCTCTGCCA GAGCCAGCCG CGCCGAGCTG
CGCAGGCGCG CCCAACGCCT GTACGCCGAC AGCCTGCGCA CGTACCTGGC CAGGTACGGC
CAAGCCCATG AAAAGTCACG GTTCGCGGCC GAAGGGCTCA AGGCGCTGGG CCAGCCGGTC
AGGTCGGCGC AGGAGGGCAC TTCACCGCCT TCTCAAGCCT TGATGCCGCC ATCGCAGGCC
CGCCGCAATG AGGCCGCACA AGCAGCGCTG CCGGCGCCGC ATGGGCCGAG CACGGCAGCG
CCGCCCGGGC CGAGTTTTGA CTGCGCCAAG GCGCGCTCGA TGCCCGAGAA GATGATTTGT
TCGGACGCCG AGCTTGCCCG GCTCGACCGC GAACTGGGCC GGGTGTACGC GCGGGCCAAA
AGCGCGGCGG CCGACGGCGC CGCCTTTGGG CGCCAGAACA GCGAGGAGTG GCGCCGGCGC
GAGGCAACGT GCCGGGACCG GGAGTGCCTG CTGCGCTGGT ATGCCAACAG GCACGATCAG
CTGATGCATG TCATTGAAGG GCCGAAGCAG GAGCCAGCGC CATCAACGGT CTCCCGATAA
 
Protein sequence
MVIIKHQGVI LASALGRGAA AVAGAWLLML GHAASSPFPD QPKTTAAPRS AALAPVQRTA 
CPLQPAAAAT GRKDGKFSLQ ADLSGMTAKN IASFIVLGKE AAAAGRPRDA EVAFLMSCRV
ADKLKGMDSV ESADAKYQLG WLYAGLALED GSARASRAEL RRRAQRLYAD SLRTYLARYG
QAHEKSRFAA EGLKALGQPV RSAQEGTSPP SQALMPPSQA RRNEAAQAAL PAPHGPSTAA
PPGPSFDCAK ARSMPEKMIC SDAELARLDR ELGRVYARAK SAAADGAAFG RQNSEEWRRR
EATCRDRECL LRWYANRHDQ LMHVIEGPKQ EPAPSTVSR