| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4700 |
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| Symbol | |
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| ID | 4685954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | + |
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| Start bp | 83264 |
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| End bp | 84334 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639826693 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_973856 |
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| Protein GI | 121583425 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0467137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC AAATCTCAGA CATCCACATC GCCCAGGCCG ACCCGCTTCC GCAACCCCGG
CTGCTGCAGG GCGAACTGCC AGCGGGCGAA GCCGAAGCCG CATTCATTGC CGCCTCGCGC
GCCGCCACCC GCAATATATT GCGCGGCCTG GATGACAGGC TGCTGGTTAT CGTGGGCCCG
TGCTCGATCC ACGAGCCTGA GTCGGCCCTG GAATACGCTG CACGGCTGCG CCGGCTGGCC
CCGCGCCTGG ACGATTCGCT GCTGCTGGTG ATGCGCGTCT ACTTCGAAAA ACCGCGCACG
CGCATGGGCT GGAAGGGTTT GATCTACGAT CCGGAACTCG ACGGCCAGGG CGACATTGGC
GCGGGCCTGC GCCATGCGCG GCGCATCTTG CTGGAATGCG CGCGGCTGGG CGTGCCGGCG
GCCTCTGAAA TCCTGGACCT GGTGACGCCG CAGTATTACG CCGAACTGCT CACCTGGGGC
GCGATCGGCG CCCGCACGGT GCAAAGCCCG CTGCACCGGC AGATGGCTTC GGCCCTGTCG
GCGCCCGTGG GCTTCAAGAA CGCTACCAAC GGCAGCGTGG GCGCCGCCAT CGACGCCATC
CATGTGGCCG TCCAGTCGCA TCGCTTTCCC TCCATCTCGC TCGAAGGCAA GGCCATCGTC
ATCACGACCA CCGGCAACCC TGATGGCCAC CTGGTGCTGC GCGGCGCCAG TGACGGGCCG
AACTACGACG CCGCCAGCGT CAGCCGCGCC GCGGCGAGCC TGTCCCAGGC CGGCCTGCCC
GCGCGGCTGG TGATCGACTG CAGCCACGGC AACAGCAACA AGGACTTTTC CAGGCAGCCC
GCCGTGGCGG CCGATATCGC GCAGCAGATC GCCAGCGGCT CGAGCAGCAT CTGCGGCCTC
ATGATTGAGA GCCACCTGGT CGAAGGCCGG CAGGACATCG TCGATGGCCG CCAAGGCCTG
CGCTACGGGC AGAGCGTCAC CGACGCCTGC ATCGGCTGGG AGGCGACCGT GGCCGTGCTG
GAGCAGCTGG CGGCGTCCGT GCGCCAGCGC CGGGCGGGCG CCAGGGCTTG A
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| Protein sequence | MSTQISDIHI AQADPLPQPR LLQGELPAGE AEAAFIAASR AATRNILRGL DDRLLVIVGP
CSIHEPESAL EYAARLRRLA PRLDDSLLLV MRVYFEKPRT RMGWKGLIYD PELDGQGDIG
AGLRHARRIL LECARLGVPA ASEILDLVTP QYYAELLTWG AIGARTVQSP LHRQMASALS
APVGFKNATN GSVGAAIDAI HVAVQSHRFP SISLEGKAIV ITTTGNPDGH LVLRGASDGP
NYDAASVSRA AASLSQAGLP ARLVIDCSHG NSNKDFSRQP AVAADIAQQI ASGSSSICGL
MIESHLVEGR QDIVDGRQGL RYGQSVTDAC IGWEATVAVL EQLAASVRQR RAGARA
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