| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4694 |
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| Symbol | |
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| ID | 4685889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | + |
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| Start bp | 76069 |
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| End bp | 77499 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639826688 |
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| Product | initiator RepB protein |
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| Protein accession | YP_973851 |
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| Protein GI | 121583420 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.251303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0571299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTGGTT TATCTGTCCG GCTTTTTATA CGAAAACTGA ATTTTTTCTG TTTTCGTATA
AAAAGCCGGA CACTTGCATT TTGTGATATT TCTGTCCAAA ACATTGATAA GATTGGACAC
ATGAAATCAG TAAGCACGCT CAACAAGCCG AATGTCTCCC TGGTGATGAT TCCAAAGGCG
GGCAAGCTTA CGGCTATCGA GCGAAAGTTG CTCAACTCGA TATTGCTTTC TTCAGCCCGG
CAGTTGCGCG AATACCGGGC ATTGCATAGC CAAGATCCTT CCAACACACA CCTTTATTCC
GCTCTTGCGG ATGAGTTGCT GGATCCAGTA GAAGTTGGCA AATCTAATTT GAAGTCAGCG
TTGCGCAAGC ATGTTTTAGC CCTAAGGCGT GCTGTGATCA ATTGGGAAGC ACCAGACGCA
AAGAGCGGGG TCGTCTGGGA AAATCTCAGT ATGCTTAGTG AAGCAAGATT TGAGATCCGC
AACGGAGGCC TCTATGTGTT ATGGGCGCTG CCGCCAAAAA TAAATGAAGC TCTGTCTGAC
TATCAAGAAT TTCATTTCAC TAAGCTTGAC CTTGAAAAAA TCTCTCGGCT CAAGAGCTAT
ACAGCTGTTG CACTTTATGA GATATGCGTC AGGTACAAGA ACAATTTCCG CAAAGAAGGT
AAAGGTGAGC GCATCACTAA CGCGAGCCCA CCTGAGTGGT GGGTTGATGC GCTCACAAAC
ATAGTCCCGA AGACAAATAA AGAGACGGGT CAGCCGGTAC GCCGAGAGTG GCGCAAAGTG
AAGAACGAGG CCGTTAAAAA AGCAATCGAA GAGATCAATG CCGTAACCGA TCTGGACATC
GTGTTGACCG AGAAGAAAAC GGGTAAGGCC GTTAGCCTGG TGCAGTTCGA AATTCGTCTG
AAGAAGCCAG AGCCGCGGGA GATTCAAAGT AGCCATTTTG AATTGATTAA GTCGGGTATC
TGCCTTGGTC TGACGGAGAC GCAAATTGCA TCTGGAATTG AGCGAACATC AGTGGAGCAA
GTCGGCTTAG GCCTTGCAAA ACTGGAGGCA CGAATCAAGC ATCAGGAACT TGAGCCTGTG
GTGAACGTGG GGCGGTACTT CAATTCGATC ATCAACGACG GTGCGCCGGT GAAGGTGGTT
AATGATGCTG AAATTGAGCG CAAGCCTGCA CTGTTGACTA CTGACACACC GGTTGCTCAA
GAGAAGAGCG TTCTGACGCT GGCCAGGGAG GATTTCATGA CTCTTCCTGA GGTGGAAAAG
CGAGGCTTCG CAGCCCGAGC CCTTAAGGTG CTGGTGGCCC GAGGTGTCGC AACGGCACGA
ATTCAACGCA ATGCCGAGGA GGGCGTCTGG AGTGGGGTGC TTCTCAGCCA GATGATTGAG
ATCTTTAGCG GGGAAAAGTC AATCAAGCCG GCACCATCAG ATGGTCCGTG A
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| Protein sequence | MIGLSVRLFI RKLNFFCFRI KSRTLAFCDI SVQNIDKIGH MKSVSTLNKP NVSLVMIPKA
GKLTAIERKL LNSILLSSAR QLREYRALHS QDPSNTHLYS ALADELLDPV EVGKSNLKSA
LRKHVLALRR AVINWEAPDA KSGVVWENLS MLSEARFEIR NGGLYVLWAL PPKINEALSD
YQEFHFTKLD LEKISRLKSY TAVALYEICV RYKNNFRKEG KGERITNASP PEWWVDALTN
IVPKTNKETG QPVRREWRKV KNEAVKKAIE EINAVTDLDI VLTEKKTGKA VSLVQFEIRL
KKPEPREIQS SHFELIKSGI CLGLTETQIA SGIERTSVEQ VGLGLAKLEA RIKHQELEPV
VNVGRYFNSI INDGAPVKVV NDAEIERKPA LLTTDTPVAQ EKSVLTLARE DFMTLPEVEK
RGFAARALKV LVARGVATAR IQRNAEEGVW SGVLLSQMIE IFSGEKSIKP APSDGP
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