| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4691 |
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| Symbol | |
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| ID | 4685886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008760 |
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| Strand | + |
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| Start bp | 71222 |
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| End bp | 73051 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639826685 |
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| Product | phage integrase family protein |
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| Protein accession | YP_973848 |
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| Protein GI | 121583417 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.298565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.0454355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA CGCCCTCCTC CACGCTACTC AATACCCGTT TTGTGCGCCG GCTGGGCCCG
CACCACTTCG CGCACCTGCG CGCCTGCGCC GAAGGCCTGG CCATCGCCGA CTGCGCCCGG
CGCTACCTGG GTGTCGAGCA CGGCCACGAG GCGATCACGG CGCACCGGCA AGCCGTCGAT
GCGGTGCGTG CGGTCGCCCG CCGCCGGGGC GAGAGCGCCT GGCGCCTGGT GGGCCTCACG
ATCCGGACCC AGGCAGGCAG TGCGCGTCCT GACCTGGACG AGTTCGCGGC CGCGCAGGGC
CTGGAGGCAT TTTCCGAAAG CGAGGTGGTC AAGCTCTACG CCGAAGCCTT TGCGGCGGAC
CGAAAAACCG CGCGCAGCCA GCGCCTGAGG GAGCGCCAGC TCGCGCTGCT GCGCCGCCTC
GAGGGCCTGG CGGCCGAGAC GCCGCAGCCG GGCGACCTCG TGGCGGGCTG GTTCGACGGC
GTGCTGGCGG CAAAATTAGT GACCGCCGGA ATCCTCACGC TGGGCGACCT CAACGCCCGG
GTTTCGGCCG GCGGGCGCTG GTTTGCTTCG CTGCCCGCCG TCGGCGTGGC CAAGGCCAGG
GGCATCGAGC GCCACCTGGC CACGCTCTTG CCGCGCGATG TCCAGCCACC CAGGCTGCTG
TTTGCCTTGA GCCGGGCGCC AGCGCTTTTT GATGCGCCCT CGCCTTCTGG CGCTTCAGGC
GCGCGCGCTG CTTCGCCCTC GGGCGAGCGT GTCCTGGACG ATCGTTCGCA GGCCGCCTTG
GCGCGATCCC TGCTGGACGC GGGCTCGGAC CTCGAGGCGG TCCAGCGCTG GATCCAGGCC
CGGGCCGGCT CGCTGGCCAC GGCGACGCTC TACCGGCGCG AAGCGCACCG CCTCTTGCTG
TGGCTGCAAT ACGAACGTGG TGAAAATGGC CGGGGCGCGA CGCTCGCGCA GATGGGCGTG
GCCGAGTGCA GCGCGTTCAT GGCGTTTTTG CAGCACATCC CGCCGCGCTG GATCTCCCGG
GTTCGCGCCG CACCGGGCCA GCCCGGCTGG GCGCCGTTTC GCGGCCAGCT CTCGCACCGA
AGCTGCCGCC AGAGCATCAC CATCATTGCC TCGCTGTTCG CCTGGCTGCA ATCCGCGCGG
TATCTGGCAG CCAACCCCTG GGTGCTCGTG AACCAGGCCA CGGGCGACGA CCCGGGCCAC
AAGATGCTCG ACACCAAGGC GCTGAGCGAG GCGGCCATGG CCGAGGTCCT TCGCTTCATA
GACGCCCAGG CGCCCTCGCC TTCCCGCGCG CGCATGCGCT TTATCGTGCG GTTTGTCGAG
GCGGTCGGCC TGCGCTCGGC AGAACTCCTG TCGGCCCGGC TGGGCGACCT GCGCATGGAG
CCCGAGGGAT GGGTCATGCA GGTGCATGGC AAGGGCGCGA AGAACCGGAT TGCCGCCGTC
CCTGGACAGG CGCTGCACGC GCTGGAGGAC TACCTGCTAG CGCGCGGCCT CGGATCGATC
CAGGCCGCGG CACCTAGCGC GCCCCTGCTG GCCGCTACGC AGGATGCGAT GGCGCCCATC
GGCTACCAGG CGCTCTACGA GCATGTCAGG GGATGGCTCG CCAAGGCGGT GCGGGCGTCC
AGCCTGCCCG CCAACGAGCG CGATCGCCTG GCCGGGGCGA CGACGCACTG GCTGCGCCAC
ACGTTTGGCA CCCGGGCGAT TGCCCGGCAG GTGCCTCTGG ACGTGATCCA GGCGCAGATG
GGGCATGCGA GCATCCAGAC CACCACGGCG ATCTACGGCC GGGCGCCGAT CCGGCGGCGC
GTGGATGAGT TGGGGAAGGC GTTTGGGTGA
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| Protein sequence | MSNTPSSTLL NTRFVRRLGP HHFAHLRACA EGLAIADCAR RYLGVEHGHE AITAHRQAVD
AVRAVARRRG ESAWRLVGLT IRTQAGSARP DLDEFAAAQG LEAFSESEVV KLYAEAFAAD
RKTARSQRLR ERQLALLRRL EGLAAETPQP GDLVAGWFDG VLAAKLVTAG ILTLGDLNAR
VSAGGRWFAS LPAVGVAKAR GIERHLATLL PRDVQPPRLL FALSRAPALF DAPSPSGASG
ARAASPSGER VLDDRSQAAL ARSLLDAGSD LEAVQRWIQA RAGSLATATL YRREAHRLLL
WLQYERGENG RGATLAQMGV AECSAFMAFL QHIPPRWISR VRAAPGQPGW APFRGQLSHR
SCRQSITIIA SLFAWLQSAR YLAANPWVLV NQATGDDPGH KMLDTKALSE AAMAEVLRFI
DAQAPSPSRA RMRFIVRFVE AVGLRSAELL SARLGDLRME PEGWVMQVHG KGAKNRIAAV
PGQALHALED YLLARGLGSI QAAAPSAPLL AATQDAMAPI GYQALYEHVR GWLAKAVRAS
SLPANERDRL AGATTHWLRH TFGTRAIARQ VPLDVIQAQM GHASIQTTTA IYGRAPIRRR
VDELGKAFG
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