Gene Pnap_4684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4684 
Symbol 
ID4685879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008760 
Strand
Start bp64908 
End bp65852 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID639826678 
ProductADP-ribosyl-(dinitrogen reductase) hydrolase 
Protein accessionYP_973841 
Protein GI121583410 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.00715956 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGAGT CGGCCCAAGG GATTTCTCCA ACCCAGCAGC AGAGCCGGTT TGACCGAGCC 
CGCGGCGCCC TGCTGGGCCT GGCCGTGGGG GACGCCATCG GCACAACGGT CGAATTCAAA
CCGCGCGGCT CTTTTGCGCC GCTGACAGAC ATGGTCGGCG GCGGTCCCTT CCAGCTGCTG
CCCGGGCAGT GGACCGACGA CACCAGCATG GCCCTGTGCC TGGCGGCCAG CCTGCTCGAA
AACGGGTTTG ACCTGCATGA CCAAATGCAG CGTTATGTCC GCTGGCATGA CGAAGGGTAC
ATGTCGAGCA ACGGACGGTG CTTCGACATC GGCATGGCGA CCTCGTCGGC GCTCGAGCGC
TTCCGGCGCA CCGGCAACCC GGTGGCGGGC TCGCGCAAGC CGGACAGCGC AGGCAACGGC
TCCATCATGC GCCTGGCGCC GGTGCCGATC CATTACCTGC AGACGCCCGA GCAGGCCATC
GAGATGAGCG CGGCGCAGTC GACCACGACC CACCAGGCGC CCGAATGCCT GGCAGCTTGC
CGGCTGCTGG CCGAAGTGAT GGTCCGGGCC CTGCAGGGCA ACTCAAAAGA CGACCTGCTG
GCGCCCTTAC GGCAAACCCT TCCGATGTCC AGCGCACTGC AGTCGATCGC CCGGGGCGAC
TACCAGACCA AATCAGAAGA CCAGATCAGG GGATCCGGGT ACGTGGTGCA GAGCCTGGAG
GCGGCGCTGT GGTGTTTCTC GCGCACGGAC AGCTTCGCGG CGTGCGTCCT GCTCGCCGCC
AACCTGGGCG ATGACGCCGA CACGACGGCG GCCGTCGCGG GCCAGCTGGC CGGTGCCTTT
TACGGCGAGT CCGGAATTCC GGCGCCATGG CTGCGCAAGC TGGCCATGGC CGGGGACATC
GGTCAGTGGG CCGAGCAGCT GCTCCTTCAA AAGCCGAAGG GATGA
 
Protein sequence
MSESAQGISP TQQQSRFDRA RGALLGLAVG DAIGTTVEFK PRGSFAPLTD MVGGGPFQLL 
PGQWTDDTSM ALCLAASLLE NGFDLHDQMQ RYVRWHDEGY MSSNGRCFDI GMATSSALER
FRRTGNPVAG SRKPDSAGNG SIMRLAPVPI HYLQTPEQAI EMSAAQSTTT HQAPECLAAC
RLLAEVMVRA LQGNSKDDLL APLRQTLPMS SALQSIARGD YQTKSEDQIR GSGYVVQSLE
AALWCFSRTD SFAACVLLAA NLGDDADTTA AVAGQLAGAF YGESGIPAPW LRKLAMAGDI
GQWAEQLLLQ KPKG